| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2330 |
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| Symbol | |
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| ID | 8019994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2450920 |
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| End bp | 2452296 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644831113 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002982276 |
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| Protein GI | 241663916 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.194216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.152351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGAT TGCCGCTAAA CCTGAATCAC ATTGCGCTGG GCCACATGAT CGACGACATC
GTCCGCGATC TGGGTGGCCC GCGCTTTATC TGGCAACTGG GCGTGCTGAT ACTGGTGCTC
GGTGCCGCCT GGCTGCTGGC GCGGCCGATC TCGCGGCGCC TGCATTCGGC GCACGTGAAC
GAGACCTTCG CCCTGCGTTT TGCCTGGTCC AGCCTGGAGC GGGCGATGTT CCCGCTGATC
GGCTGGCTGC TGGTGGTGGG CGCGCGCTAT GCGCTGGTCG GCACCATGCC GATCAGCGTG
TTCCGGCTGG CCGCGGTGCC GCTGTTTGGC CTGGCGATCC TGTATCTCGG CTTCTACGTG
TTGCGCCGCG TGCTGTCGGC TAACGGCGAG CTGCACGGCA TGCTCGTCCT CGCGGAGCGC
GTGCTCACCA CGCTGATGTG GATCGGCATG GTGCTCTACG TGCTGGGCGT GCTCGGCGAT
GTGGTGGATT ACCTCGACGG CATCCGCTTT GCGCTGGGTG GCAAGCAGAA GGTGAGCCTG
GCGGCCATGC TGATGGGCGT GGTGTGGATT CTCGTCACTG TGCTGGTGGC GATGTGGTTC
GGCTCGTGGC TGGATAGCCG CATCACGCGT GCTTCCGCGA TCGATGCCAA CCTGAAGGTG
GTGTTGTCGC GTGTGACCAA GGCGGTGCTG CTGCTGGTGT CGCTGCTGCT GAGCCTCTCG
CTGGTGGGCA TCGACCTGAC GGTGCTGTCG GTGTTTGGCG GCGCGCTTGG CGTCGGCCTG
GGTTTCGGCT TGCAAAAGAT CGCCAGCAAT TACGTTTCGG GCTTCATCAT CCTGCTGGAG
CGCTCGCTCA AGCTGGGCGA TCAGATTACC GTCAGCACGT ACACCGGCAT CGTCACGCAG
ATCCGCACCC GCTACACCGT CGTGCGCAAT GGCGACGGCG ATACGCTCGT CCCGAACGAA
CTGATGGTCG CGCAGGCCGT TCAGAACCAC AACGAGCGCG GCACCGTGCG TGTGGCGGTG
CGCGTGCAGG CGTCGTATGA CGCTGATCCT GAAAGCGTGC TGGCGTTGCT GCTGCAATGT
GCAGAGGGCA TCCCGCGTGT TCTGCCCGAA CCGGCGCCCG CCGCCTTCAT GGCCCTGTTC
GCCGACAGCG GCATCGAATA TGAGCTTGGC GTCTGGATCG GCGATCCGCA TAACGGCAAG
CTGGGCGTGC AGTCCGACCT GAACCGCGCG ATTTACCGTC GCTTCAAGGA AGCAGGCATC
GATATCCCCT ACCCGCAGCG GGAAGTGCGT GTGCTTGGGG CGTCGGCGCT GCAACAGGGC
GTCACGCGCA CTTTGAGTGA TGTAACAGCC CCATCCACGC CATCACTGTC GGACTAA
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| Protein sequence | MNGLPLNLNH IALGHMIDDI VRDLGGPRFI WQLGVLILVL GAAWLLARPI SRRLHSAHVN
ETFALRFAWS SLERAMFPLI GWLLVVGARY ALVGTMPISV FRLAAVPLFG LAILYLGFYV
LRRVLSANGE LHGMLVLAER VLTTLMWIGM VLYVLGVLGD VVDYLDGIRF ALGGKQKVSL
AAMLMGVVWI LVTVLVAMWF GSWLDSRITR ASAIDANLKV VLSRVTKAVL LLVSLLLSLS
LVGIDLTVLS VFGGALGVGL GFGLQKIASN YVSGFIILLE RSLKLGDQIT VSTYTGIVTQ
IRTRYTVVRN GDGDTLVPNE LMVAQAVQNH NERGTVRVAV RVQASYDADP ESVLALLLQC
AEGIPRVLPE PAPAAFMALF ADSGIEYELG VWIGDPHNGK LGVQSDLNRA IYRRFKEAGI
DIPYPQREVR VLGASALQQG VTRTLSDVTA PSTPSLSD
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