| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2319 |
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| Symbol | |
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| ID | 8019983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2440814 |
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| End bp | 2442019 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644831102 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_002982265 |
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| Protein GI | 241663905 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.405352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00559033 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAATTA AGTTTGCCAA AGTTCTGCCG CTTGCGGCTG CCGTGGCACT CGTAGCAGCT
TGCGGTAAGA ACGAGGAAAA GCCCGCAAAC CAAGCTGCTG CACCTGCAGC AACGTCGGCT
CCGGCGGCGG CTGCCGGCGG CGAGACCGTC GTCAAGATTG GTCACGCGGC TCCGCTCACG
GGCGGTATTG CTCACCTTGG CAAAGACAAC GAAAACGGTG CACGTCTGGC CGTTGAAGAA
GCCAACAAGG AAGGCCTGAC CATCGACGGC AAGAAGATCA AGCTGGAACT GGTCGGTGAA
GACGATGCAG GCGACCCGAA GACGGGCACC GCCGTGGCGC AGAAGCTGGT TGACGAGCAC
GTTGTTGCCG TTGTCGGCCA CCTGAACTCG GGCGTTTCGA TCCCGGCCTC GAAGATCTAC
AGCGATGCAG GCATCGTGCA GATCTCGCCG TCGTCGACGA ACCCCGACTA CACCAAGCAA
GGCTTCAAGA CGACCTACCG CGTGGTGGCC ACCGACGCGC AGCAAGGCCC GGCACTGGCA
AACTACGCCG CCAAGACCCT GGGCGCCAAG ACCGTGGCAA TTGTTGACGA TGCCACCGCC
TACGGTAAGG GCCTGGCTGA CGAGTTCGAG AAGACCGCGA AGGCTGACGG CGTGAACGTC
GTGGCGCGTG AGGCGACCAA CGACAAGGCG ACCGACTTCA AGGCCATTCT GACCAAGATC
AAGGGCAAGA AGCCGGACGT GATCATGTAC GGCGGCATGG ACGCCACCGG CGGTCCGTTC
GCCAAGCAAG CCAAGGAACT GGGCATCACG GCCAAGATCG TTGGCGGCGA CGGCGTGTGT
ACCGACAAGG TGGCCGAACT GGCCGGCGAC GCGATCGATA ACATCGTCTG CTCGGAAGCA
GGCCTGGCGC TGTCGAAGAT GGAGAAGGGC GCGGACTTCG AGAAGAAGTA CCAAGCGCGC
TTCAACACGC CGGTGCAGAT CTACGCACCG TTCACGTATG ACGCCGTCAA CGTGATCATC
GATGCGATGA AGCGTGCCAA CTCGACCGAT CCGGCCAAGA TCCTGGCTGC CATGCCGGCA
ACCAACTACA ACGGCGTGAT CGGCAACATC GCGTTCGACG ACAAGGGTGA CCTGAAGCAA
GGCTCCATCA CCCTGTACAA CTACAAGGAC AAGAAGAAGA GCGTTCTTGA CGTTGTGAAG
ATGTAA
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| Protein sequence | MQIKFAKVLP LAAAVALVAA CGKNEEKPAN QAAAPAATSA PAAAAGGETV VKIGHAAPLT
GGIAHLGKDN ENGARLAVEE ANKEGLTIDG KKIKLELVGE DDAGDPKTGT AVAQKLVDEH
VVAVVGHLNS GVSIPASKIY SDAGIVQISP SSTNPDYTKQ GFKTTYRVVA TDAQQGPALA
NYAAKTLGAK TVAIVDDATA YGKGLADEFE KTAKADGVNV VAREATNDKA TDFKAILTKI
KGKKPDVIMY GGMDATGGPF AKQAKELGIT AKIVGGDGVC TDKVAELAGD AIDNIVCSEA
GLALSKMEKG ADFEKKYQAR FNTPVQIYAP FTYDAVNVII DAMKRANSTD PAKILAAMPA
TNYNGVIGNI AFDDKGDLKQ GSITLYNYKD KKKSVLDVVK M
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