Gene Rpic12D_2177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2177 
Symbol 
ID8019839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2319766 
End bp2320317 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content66% 
IMG OID644830959 
Productsuperoxide dismutase copper/zinc binding 
Protein accessionYP_002982123 
Protein GI241663763 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2032] Cu/Zn superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.462725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0481765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAC TCGTGATTGC AGTCGCCGCG ATCGGCCTGA TGGCCGGCTG CGCATCGAAC 
TCAGCGTCGA CGGCCAAGGC GGCGAATGCC GGTGACGGCG CCATGACGGC CTCGGCCGTG
CTGGCGCCCA AGAGCGGCAG CACCGTGCAA GGCAGCGTGA AGCTTGCACA GCAAGGCGAC
AATCGGGTTG CCATGGCCGT GGATATTTCC GGCCTGCCGG CCAACGGCAT GTTCGGCTTC
CATGTGCATG AGAGGGGCGA TTGCTCGTCG CCGGATGGCA ATAGTGCCGG CGGCCACTTC
AACCCCACCA GCCAGCAGCA CGGTGATCCG CGTCAAGGCG CGCATCACGC TGGCGACATT
CCGATGCTGC AATCCGATGC CAACGGCAAG GCCGTCGGCT CGATCGTTCT TTCCGGTGTG
ACGCTGTCGC CCGGGCCCAC CAGCCTGGTC GGCCACGCGT TGATCGTCCA CGCAGGCAAG
GACGACTACA TGACCCAACC GACCGGCAAT TCCGGCGGGC GCGTCGCCTG CGGCGTGATC
GTGGCGAACT GA
 
Protein sequence
MKQLVIAVAA IGLMAGCASN SASTAKAANA GDGAMTASAV LAPKSGSTVQ GSVKLAQQGD 
NRVAMAVDIS GLPANGMFGF HVHERGDCSS PDGNSAGGHF NPTSQQHGDP RQGAHHAGDI
PMLQSDANGK AVGSIVLSGV TLSPGPTSLV GHALIVHAGK DDYMTQPTGN SGGRVACGVI
VAN