Gene Rpic12D_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2172 
Symbol 
ID8019834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2313374 
End bp2314093 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content72% 
IMG OID644830954 
Producthypothetical protein 
Protein accessionYP_002982118 
Protein GI241663758 
COG category[S] Function unknown 
COG ID[COG5343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.196397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCGC GCCGCCACCC CGATCTCGTC GACAAGCTGG CCGCCGAATA TGCGGTCGGC 
ACCTTGCGCG CCGGCGCACG CCGCCGGTTC GAGCAGATCC TTCGCCACGA CGACGCCGTG
CGCGCCACGG TTGAACGCTG GCAACGCTAT CTGGCCGACT TGCCCGCGCT CCAGCCTGCC
ACGGCGCCGC TGCCGGAAAT CCTCTGCCGC GTGGAAGTGC AACTCGGCTG GCGCGAGCCG
ACGCCGGCGC GGAAGGCGCT CTGGCAACGG ATTTGGCAAG GCACCGGCTT CTGGCGCGGC
GCCACCGCAG TCGCGGCGGT TGTCGCGGCG GTCGCGATCG GGCTGAACCT GCGGCTGGCG
CAGCAATTGC GTGATGCACC TGTCGCCAAC GCCGTGGCCG TGCTGCAGGA CGCGCAGGCC
CAGGCGGCCG TCCTCGTCAC CTGGGATGCG CGCACGGGCA CCCTGTCGCT CAAGCGGCTG
GATGCCACGC CGCTCAATAC CGAACAGGCC TTGCAGCTCT GGGCGCTGCC CCCCGGCGGG
CATCCGCAGT CACTTGGGGT GATCGGGCAC CAGCGCGCCG TGCGGCTGAC GGTAGCGCAG
CCGTTGCGGC AGGTGCCGGC GCTCGCCATC AGCGTAGAAC CGCGTGGCGG CTCGCCCAAT
CCGCAGGGGC CGACCGGGCC GGTGGTCTTC AAGGGCGCGC TGATCGACAG CACGCTGTAG
 
Protein sequence
MDPRRHPDLV DKLAAEYAVG TLRAGARRRF EQILRHDDAV RATVERWQRY LADLPALQPA 
TAPLPEILCR VEVQLGWREP TPARKALWQR IWQGTGFWRG ATAVAAVVAA VAIGLNLRLA
QQLRDAPVAN AVAVLQDAQA QAAVLVTWDA RTGTLSLKRL DATPLNTEQA LQLWALPPGG
HPQSLGVIGH QRAVRLTVAQ PLRQVPALAI SVEPRGGSPN PQGPTGPVVF KGALIDSTL