Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2172 |
Symbol | |
ID | 8019834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2313374 |
End bp | 2314093 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644830954 |
Product | hypothetical protein |
Protein accession | YP_002982118 |
Protein GI | 241663758 |
COG category | [S] Function unknown |
COG ID | [COG5343] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.196397 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCCGC GCCGCCACCC CGATCTCGTC GACAAGCTGG CCGCCGAATA TGCGGTCGGC ACCTTGCGCG CCGGCGCACG CCGCCGGTTC GAGCAGATCC TTCGCCACGA CGACGCCGTG CGCGCCACGG TTGAACGCTG GCAACGCTAT CTGGCCGACT TGCCCGCGCT CCAGCCTGCC ACGGCGCCGC TGCCGGAAAT CCTCTGCCGC GTGGAAGTGC AACTCGGCTG GCGCGAGCCG ACGCCGGCGC GGAAGGCGCT CTGGCAACGG ATTTGGCAAG GCACCGGCTT CTGGCGCGGC GCCACCGCAG TCGCGGCGGT TGTCGCGGCG GTCGCGATCG GGCTGAACCT GCGGCTGGCG CAGCAATTGC GTGATGCACC TGTCGCCAAC GCCGTGGCCG TGCTGCAGGA CGCGCAGGCC CAGGCGGCCG TCCTCGTCAC CTGGGATGCG CGCACGGGCA CCCTGTCGCT CAAGCGGCTG GATGCCACGC CGCTCAATAC CGAACAGGCC TTGCAGCTCT GGGCGCTGCC CCCCGGCGGG CATCCGCAGT CACTTGGGGT GATCGGGCAC CAGCGCGCCG TGCGGCTGAC GGTAGCGCAG CCGTTGCGGC AGGTGCCGGC GCTCGCCATC AGCGTAGAAC CGCGTGGCGG CTCGCCCAAT CCGCAGGGGC CGACCGGGCC GGTGGTCTTC AAGGGCGCGC TGATCGACAG CACGCTGTAG
|
Protein sequence | MDPRRHPDLV DKLAAEYAVG TLRAGARRRF EQILRHDDAV RATVERWQRY LADLPALQPA TAPLPEILCR VEVQLGWREP TPARKALWQR IWQGTGFWRG ATAVAAVVAA VAIGLNLRLA QQLRDAPVAN AVAVLQDAQA QAAVLVTWDA RTGTLSLKRL DATPLNTEQA LQLWALPPGG HPQSLGVIGH QRAVRLTVAQ PLRQVPALAI SVEPRGGSPN PQGPTGPVVF KGALIDSTL
|
| |