Gene Rpic12D_2167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2167 
Symbol 
ID8019829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2306436 
End bp2309444 
Gene Length3009 bp 
Protein Length1002 aa 
Translation table11 
GC content66% 
IMG OID644830949 
Productphosphoenolpyruvate carboxylase 
Protein accessionYP_002982113 
Protein GI241663753 
COG category[C] Energy production and conversion 
COG ID[COG2352] Phosphoenolpyruvate carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.524225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.617309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC CCGCCGCGCG CCGCGCTTCC TCGCGCGCGA CAACCGCCCG CAAGGCTTCC 
GCCGCTCCCG CCAAGACCAG CAAGGCCACG AAGGCCATCA AGGCTGCCAA GCCCGCCGCC
AAACCGGTGG CCACGGCCAA TGGCGCGGAC GAAGCCAATG GCGCATCACT CGGCCCCACT
TCCCGGCGCT CGTCGGGCAG CGCCGCGGCC AAGGATCAGC CGCTGAAGGA AGACATCCGC
TTCCTCGGGC GCCTGCTGGG CGACGTGCTG CGTGAACAGG AAGGTGGCGC CGCCTTCGAA
ACCGTCGAGA CGATCCGCCA GACCGCCGTG CGTTTCCGCC GCGACGGCGA CCGCCAGGCC
GAGCAGGAAC TCGACCGCCT GCTGAAAGCC TTGTCGCGTG AGCAAACCAA CTCCGTGGTG
CGCGCGTTCA GCTACTTCTC TCACCTGGCC AACATTGCCG AAGACCAGCA CCACAACCGC
CGCCGCCGCG TGCATGCGCT GGCGGGCTCG CCACCGCAGC CGGGCAGCAT GATGCGCGCG
CTGCTGTCGG TGGCCGACGA GGGTGTCTCG GGTGAGACGC TGCGCCGCTT CTTCGATGCC
GCGTTGATCG TGCCCGTGCT CACGGCCCAC CCGACCGAGG TGCAGCGCAA GAGCATTCTC
GATGCACAGC GTGAAATCGC CCGCCTGCTG GCCGAACGCG ACACGCCGCT GACCACCCGC
GAGCGTGAAC GCAACACGAC GCTGCTGCGC GCGCACGTGA CCAAACTGTG GCAGACACGC
ATGCTGCGCA CCACGCGTCT GATGGTGGCC GACGAGATCG AAAACGCGCT GTCGTACTAC
CAGACGACGT TCCTGCGCGA GATTCCCGCG CTGTACCGCG AACTGGAAGA GGACGTCGCT
GCCGTATTCC CGCGCCGTGG CGCACGTGGC GAACCCACCC CGTTGGCGCC GTTCTTCCAG
ATGGGCTCGT GGATCGGCGG CGACCGCGAC GGCAACCCCT TCGTCACGGC AGAAACCCTG
CGCTACGCCG CCCGCAAGCA GGCCAGCGTG ATCCTTGCGT GGTATCTGGA AGAGATCCAC
GCGCTGGGCG CCGAACTGTC GATGTCGACA TCGCAGGTGG ATGTGAGTGC TGAATTGCTG
GCGCTGGCGG AGCAGTCGCC CGATCGATCG GAGCATCGCT CGGATGAGCC ATACCGCCGT
GCGCTGATCG GGGTCTATGC GCGACTGGCC GCCACCTGCC GTGAGCTGAC CGGTGAAGAC
GCCGGCCGCC ACGCCGTCGG GCCCGCTCCG GCTTACAGCA ACGCAGAAGA ACTGCGCGCC
GACATCCAGA TCGTGATCGA TTCATTGGCG GCGCACCACG GCGAAGTGCT GGCCGATGCG
CGACTGGCAT CGCTGGCGCG CGCGATCGAT GTGTTCGGCT TCCACCTGTC GTCGATCGAC
CTGCGGCAAG TGTCGGACGT GCACGAAGCG ACCGTCGCCG AGCTGCTGAA AGTGGCCGGT
GTGGAAGGCG CCTATGCTGC GCTGTCCGAG GCCGACAAGC GCACGCTGCT GTTGCGCGAG
CTGCAACAGC CGCGCGTGCT GACGCTGCCG TTCCATGCCT ACAGCGAGCA GACCACGTCG
GAGATCGACA TCTTCCGCGC TGCCCGTGAG GTGCGCGCCC GCTACGGCAA TCGCATCGTG
CGCAACTACA TCATTTCGCA CACCGAGACG CTGTCCGACT TGCTCGAAGT GATGTTGCTG
CAGAAGGAAG CCGGCATGTT CCGCACGGGC GCCAATGGCA GCGGCAGTGC CGCGCTGGAC
GTCATGGTGA TCCCACTGTT CGAAACCATC GAAGACTTGC GCAACGCCCC GGAAATCATG
GGCGACCTGC TCGATCTGCC CGGCTTCGAT GCCGTACTGG CCGCGCAAGG CAACGAGCAG
GAAGTCATGC TCGGCTATTC GGATTCCAAC AAGGACGGCG GCTTCCTCAC TTCTAACTGG
GAGCTCTACA AGGCCGAACT GGCGCTGGTG GAGCTGTTCC AGCGCAAGGG CGTGCGTCTG
CGCCTGTTCC ACGGCCGCGG CGGCACTGTC GGGCGTGGCG GCGGTCCGAC CTACCAGGCC
ATCCTGTCGC AGCCGCCGGG CACGGTGAAC GGGCAGATCC GCCTGACTGA GCAGGGCGAG
ATCATCTCCA GCAAGTTCGC CAATCCAGAG ATTGGCCGGC GCAACCTGGA GACCATCGTC
GCGGCCACGC TGGAAGCCAC GCTGCTGCCA ACGCGCAACC GCCCGAAGGG TCTTGAAGAG
TTCGAAGCAG CCATGCAGGC GCTGTCGGAC AACGCCTTTG CCGCGTACCG CAACCTCGTC
TACGAGACCC CGGGCTTCAA GGACTACTTC TTCGCCACCA CGCCGATCAC CGAGATTGCC
GACCTGAACC TGGGTTCGCG CCCGGCCTCG CGCAAGCTGA TGGACAAGAA ACACCGCCGC
ATCGAAGACC TGCGTGCCAT TCCGTGGGGC TTCTCATGGG GCCAGTGCCG TCTGCTGCTG
CCGGGCTGGT TCGGCTTTGG CAGCGCGGTG CAGCGCTGGC TCGACGATGC GGGCAACGCC
AAGGCCCGTG CTGCGCGCCT GACCACGCTC AAGCGCATGC ACAAGCAGTG GCCGTTCTTT
GCGAACCTGC TGTCGAACAT GGACATGGTG CTGTCCAAGG CCGACCTGAA CGTGGCGTCG
CGCTACGCCC AATTGTGCGA CGACCGCAAG CTGCGCAACG CGGTGTTCTC GCGCATCTCT
GCGGAGTTCA CGTTGACCGA GCAGATGCTG GCAGCCATCA CGGGACAGTC GGAGCGCCTG
GCCGACAACC CGCTGCTGGC GCGCTCCATC AAGAACCGCT TCCCGTACCT TGACCCGCTG
AATCACCTGC AGGTCGAACT GCTCAAGCGC TTCCGCTCGG GCAAGGCCGG CAGCGACGAT
GCACGCGTGC GGCGCGGCAT TCATCTGTCG ATCAACGGGA TTGCCGCGGG CCTTCGCAAC
AGCGGCTGA
 
Protein sequence
MTQPAARRAS SRATTARKAS AAPAKTSKAT KAIKAAKPAA KPVATANGAD EANGASLGPT 
SRRSSGSAAA KDQPLKEDIR FLGRLLGDVL REQEGGAAFE TVETIRQTAV RFRRDGDRQA
EQELDRLLKA LSREQTNSVV RAFSYFSHLA NIAEDQHHNR RRRVHALAGS PPQPGSMMRA
LLSVADEGVS GETLRRFFDA ALIVPVLTAH PTEVQRKSIL DAQREIARLL AERDTPLTTR
ERERNTTLLR AHVTKLWQTR MLRTTRLMVA DEIENALSYY QTTFLREIPA LYRELEEDVA
AVFPRRGARG EPTPLAPFFQ MGSWIGGDRD GNPFVTAETL RYAARKQASV ILAWYLEEIH
ALGAELSMST SQVDVSAELL ALAEQSPDRS EHRSDEPYRR ALIGVYARLA ATCRELTGED
AGRHAVGPAP AYSNAEELRA DIQIVIDSLA AHHGEVLADA RLASLARAID VFGFHLSSID
LRQVSDVHEA TVAELLKVAG VEGAYAALSE ADKRTLLLRE LQQPRVLTLP FHAYSEQTTS
EIDIFRAARE VRARYGNRIV RNYIISHTET LSDLLEVMLL QKEAGMFRTG ANGSGSAALD
VMVIPLFETI EDLRNAPEIM GDLLDLPGFD AVLAAQGNEQ EVMLGYSDSN KDGGFLTSNW
ELYKAELALV ELFQRKGVRL RLFHGRGGTV GRGGGPTYQA ILSQPPGTVN GQIRLTEQGE
IISSKFANPE IGRRNLETIV AATLEATLLP TRNRPKGLEE FEAAMQALSD NAFAAYRNLV
YETPGFKDYF FATTPITEIA DLNLGSRPAS RKLMDKKHRR IEDLRAIPWG FSWGQCRLLL
PGWFGFGSAV QRWLDDAGNA KARAARLTTL KRMHKQWPFF ANLLSNMDMV LSKADLNVAS
RYAQLCDDRK LRNAVFSRIS AEFTLTEQML AAITGQSERL ADNPLLARSI KNRFPYLDPL
NHLQVELLKR FRSGKAGSDD ARVRRGIHLS INGIAAGLRN SG