Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2167 |
Symbol | |
ID | 8019829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2306436 |
End bp | 2309444 |
Gene Length | 3009 bp |
Protein Length | 1002 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644830949 |
Product | phosphoenolpyruvate carboxylase |
Protein accession | YP_002982113 |
Protein GI | 241663753 |
COG category | [C] Energy production and conversion |
COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.524225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.617309 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGC CCGCCGCGCG CCGCGCTTCC TCGCGCGCGA CAACCGCCCG CAAGGCTTCC GCCGCTCCCG CCAAGACCAG CAAGGCCACG AAGGCCATCA AGGCTGCCAA GCCCGCCGCC AAACCGGTGG CCACGGCCAA TGGCGCGGAC GAAGCCAATG GCGCATCACT CGGCCCCACT TCCCGGCGCT CGTCGGGCAG CGCCGCGGCC AAGGATCAGC CGCTGAAGGA AGACATCCGC TTCCTCGGGC GCCTGCTGGG CGACGTGCTG CGTGAACAGG AAGGTGGCGC CGCCTTCGAA ACCGTCGAGA CGATCCGCCA GACCGCCGTG CGTTTCCGCC GCGACGGCGA CCGCCAGGCC GAGCAGGAAC TCGACCGCCT GCTGAAAGCC TTGTCGCGTG AGCAAACCAA CTCCGTGGTG CGCGCGTTCA GCTACTTCTC TCACCTGGCC AACATTGCCG AAGACCAGCA CCACAACCGC CGCCGCCGCG TGCATGCGCT GGCGGGCTCG CCACCGCAGC CGGGCAGCAT GATGCGCGCG CTGCTGTCGG TGGCCGACGA GGGTGTCTCG GGTGAGACGC TGCGCCGCTT CTTCGATGCC GCGTTGATCG TGCCCGTGCT CACGGCCCAC CCGACCGAGG TGCAGCGCAA GAGCATTCTC GATGCACAGC GTGAAATCGC CCGCCTGCTG GCCGAACGCG ACACGCCGCT GACCACCCGC GAGCGTGAAC GCAACACGAC GCTGCTGCGC GCGCACGTGA CCAAACTGTG GCAGACACGC ATGCTGCGCA CCACGCGTCT GATGGTGGCC GACGAGATCG AAAACGCGCT GTCGTACTAC CAGACGACGT TCCTGCGCGA GATTCCCGCG CTGTACCGCG AACTGGAAGA GGACGTCGCT GCCGTATTCC CGCGCCGTGG CGCACGTGGC GAACCCACCC CGTTGGCGCC GTTCTTCCAG ATGGGCTCGT GGATCGGCGG CGACCGCGAC GGCAACCCCT TCGTCACGGC AGAAACCCTG CGCTACGCCG CCCGCAAGCA GGCCAGCGTG ATCCTTGCGT GGTATCTGGA AGAGATCCAC GCGCTGGGCG CCGAACTGTC GATGTCGACA TCGCAGGTGG ATGTGAGTGC TGAATTGCTG GCGCTGGCGG AGCAGTCGCC CGATCGATCG GAGCATCGCT CGGATGAGCC ATACCGCCGT GCGCTGATCG GGGTCTATGC GCGACTGGCC GCCACCTGCC GTGAGCTGAC CGGTGAAGAC GCCGGCCGCC ACGCCGTCGG GCCCGCTCCG GCTTACAGCA ACGCAGAAGA ACTGCGCGCC GACATCCAGA TCGTGATCGA TTCATTGGCG GCGCACCACG GCGAAGTGCT GGCCGATGCG CGACTGGCAT CGCTGGCGCG CGCGATCGAT GTGTTCGGCT TCCACCTGTC GTCGATCGAC CTGCGGCAAG TGTCGGACGT GCACGAAGCG ACCGTCGCCG AGCTGCTGAA AGTGGCCGGT GTGGAAGGCG CCTATGCTGC GCTGTCCGAG GCCGACAAGC GCACGCTGCT GTTGCGCGAG CTGCAACAGC CGCGCGTGCT GACGCTGCCG TTCCATGCCT ACAGCGAGCA GACCACGTCG GAGATCGACA TCTTCCGCGC TGCCCGTGAG GTGCGCGCCC GCTACGGCAA TCGCATCGTG CGCAACTACA TCATTTCGCA CACCGAGACG CTGTCCGACT TGCTCGAAGT GATGTTGCTG CAGAAGGAAG CCGGCATGTT CCGCACGGGC GCCAATGGCA GCGGCAGTGC CGCGCTGGAC GTCATGGTGA TCCCACTGTT CGAAACCATC GAAGACTTGC GCAACGCCCC GGAAATCATG GGCGACCTGC TCGATCTGCC CGGCTTCGAT GCCGTACTGG CCGCGCAAGG CAACGAGCAG GAAGTCATGC TCGGCTATTC GGATTCCAAC AAGGACGGCG GCTTCCTCAC TTCTAACTGG GAGCTCTACA AGGCCGAACT GGCGCTGGTG GAGCTGTTCC AGCGCAAGGG CGTGCGTCTG CGCCTGTTCC ACGGCCGCGG CGGCACTGTC GGGCGTGGCG GCGGTCCGAC CTACCAGGCC ATCCTGTCGC AGCCGCCGGG CACGGTGAAC GGGCAGATCC GCCTGACTGA GCAGGGCGAG ATCATCTCCA GCAAGTTCGC CAATCCAGAG ATTGGCCGGC GCAACCTGGA GACCATCGTC GCGGCCACGC TGGAAGCCAC GCTGCTGCCA ACGCGCAACC GCCCGAAGGG TCTTGAAGAG TTCGAAGCAG CCATGCAGGC GCTGTCGGAC AACGCCTTTG CCGCGTACCG CAACCTCGTC TACGAGACCC CGGGCTTCAA GGACTACTTC TTCGCCACCA CGCCGATCAC CGAGATTGCC GACCTGAACC TGGGTTCGCG CCCGGCCTCG CGCAAGCTGA TGGACAAGAA ACACCGCCGC ATCGAAGACC TGCGTGCCAT TCCGTGGGGC TTCTCATGGG GCCAGTGCCG TCTGCTGCTG CCGGGCTGGT TCGGCTTTGG CAGCGCGGTG CAGCGCTGGC TCGACGATGC GGGCAACGCC AAGGCCCGTG CTGCGCGCCT GACCACGCTC AAGCGCATGC ACAAGCAGTG GCCGTTCTTT GCGAACCTGC TGTCGAACAT GGACATGGTG CTGTCCAAGG CCGACCTGAA CGTGGCGTCG CGCTACGCCC AATTGTGCGA CGACCGCAAG CTGCGCAACG CGGTGTTCTC GCGCATCTCT GCGGAGTTCA CGTTGACCGA GCAGATGCTG GCAGCCATCA CGGGACAGTC GGAGCGCCTG GCCGACAACC CGCTGCTGGC GCGCTCCATC AAGAACCGCT TCCCGTACCT TGACCCGCTG AATCACCTGC AGGTCGAACT GCTCAAGCGC TTCCGCTCGG GCAAGGCCGG CAGCGACGAT GCACGCGTGC GGCGCGGCAT TCATCTGTCG ATCAACGGGA TTGCCGCGGG CCTTCGCAAC AGCGGCTGA
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Protein sequence | MTQPAARRAS SRATTARKAS AAPAKTSKAT KAIKAAKPAA KPVATANGAD EANGASLGPT SRRSSGSAAA KDQPLKEDIR FLGRLLGDVL REQEGGAAFE TVETIRQTAV RFRRDGDRQA EQELDRLLKA LSREQTNSVV RAFSYFSHLA NIAEDQHHNR RRRVHALAGS PPQPGSMMRA LLSVADEGVS GETLRRFFDA ALIVPVLTAH PTEVQRKSIL DAQREIARLL AERDTPLTTR ERERNTTLLR AHVTKLWQTR MLRTTRLMVA DEIENALSYY QTTFLREIPA LYRELEEDVA AVFPRRGARG EPTPLAPFFQ MGSWIGGDRD GNPFVTAETL RYAARKQASV ILAWYLEEIH ALGAELSMST SQVDVSAELL ALAEQSPDRS EHRSDEPYRR ALIGVYARLA ATCRELTGED AGRHAVGPAP AYSNAEELRA DIQIVIDSLA AHHGEVLADA RLASLARAID VFGFHLSSID LRQVSDVHEA TVAELLKVAG VEGAYAALSE ADKRTLLLRE LQQPRVLTLP FHAYSEQTTS EIDIFRAARE VRARYGNRIV RNYIISHTET LSDLLEVMLL QKEAGMFRTG ANGSGSAALD VMVIPLFETI EDLRNAPEIM GDLLDLPGFD AVLAAQGNEQ EVMLGYSDSN KDGGFLTSNW ELYKAELALV ELFQRKGVRL RLFHGRGGTV GRGGGPTYQA ILSQPPGTVN GQIRLTEQGE IISSKFANPE IGRRNLETIV AATLEATLLP TRNRPKGLEE FEAAMQALSD NAFAAYRNLV YETPGFKDYF FATTPITEIA DLNLGSRPAS RKLMDKKHRR IEDLRAIPWG FSWGQCRLLL PGWFGFGSAV QRWLDDAGNA KARAARLTTL KRMHKQWPFF ANLLSNMDMV LSKADLNVAS RYAQLCDDRK LRNAVFSRIS AEFTLTEQML AAITGQSERL ADNPLLARSI KNRFPYLDPL NHLQVELLKR FRSGKAGSDD ARVRRGIHLS INGIAAGLRN SG
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