Gene Rpic12D_2153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2153 
Symbol 
ID8019815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2290613 
End bp2291569 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content64% 
IMG OID644830935 
Productthioredoxin reductase 
Protein accessionYP_002982099 
Protein GI241663739 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID[TIGR01292] thioredoxin-disulfide reductase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.969122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.900366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC ACGCAAAAGT GCTGATCCTT GGCTCCGGCC CCGCCGGTTA CACAGCCGCG 
ATTTACGCTG CCCGGGCCAA CCTGAACCCG GTGCTGGTTA CCGGCCTGGC GCAGGGCGGC
CAGCTGATGA CCACCACCGA CGTGGAAAAC TGGCCCGCTG ACAAGGAACA CCTGCAAGGC
CCCGAGTTGA TGCAGCGCTT CCTGGAGCAC GCCGAGCGTT TCAAGACCGA AGTGCTGTTC
GACCACATCC ACACCGCGCA TCTGAACGAA AAGCCGATCC GCCTGGTGGG CGATTCCGGC
GAATACACCT GCGACGCGCT GATCGTCTCC ACCGGCGCGT CGGCCCAATA CCTGGGCCTG
CCCTCGGAAG AAGCCTTTGC GGGCCGCGGC GTGTCGGCCT GCGCCACGTG CGACGGGTTC
TTCTACAAGG GCCAGGAAGT GGCCGTGGTC GGCGGGGGCA ACACCGCCGT GGAAGAAGCG
CTGTACCTGG CCAACATTGC CAGCAAGGTC ACGCTCATCC ACCGCCGCGA CAAGTTCCGC
GCCGAACCGA TCCTGATCGA CCGACTGCAT GAGCAGGAGA AGAAAGGCAA GATCGAGATC
AAGACGAACA TGGTGCTCGA CGAGATCCTG GGCGATGACT CCGGCGTGAC GGGCGCCCGG
CTGAAAGGCA CGCACGAAAA CGAAGGCAAG ACCGAAGAGA TCAAGGTGGC GGGCGTGTTC
ATCGCCATCG GCCACAAACC GAACACCGAC ATCTTCCGCG GCCAGCTCGA CATGAACGAT
ACGGGCTACA TCCGCACGAA GAGCGGCCTC GATGGCATGG CCACCGCCAC CAACATCCCG
GGCGTGTTCG CCGCCGGCGA CGTGCAGGAC CACATCTACC GCCAGGCCAT CACCAGCGCC
GGCACGGGCT GCATGGCCGC GCTGGACGCC CAGCGCTACC TGGAAAGCCT GGAATAA
 
Protein sequence
MAKHAKVLIL GSGPAGYTAA IYAARANLNP VLVTGLAQGG QLMTTTDVEN WPADKEHLQG 
PELMQRFLEH AERFKTEVLF DHIHTAHLNE KPIRLVGDSG EYTCDALIVS TGASAQYLGL
PSEEAFAGRG VSACATCDGF FYKGQEVAVV GGGNTAVEEA LYLANIASKV TLIHRRDKFR
AEPILIDRLH EQEKKGKIEI KTNMVLDEIL GDDSGVTGAR LKGTHENEGK TEEIKVAGVF
IAIGHKPNTD IFRGQLDMND TGYIRTKSGL DGMATATNIP GVFAAGDVQD HIYRQAITSA
GTGCMAALDA QRYLESLE