| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2151 |
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| Symbol | lolA |
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| ID | 8019813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2287281 |
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| End bp | 2287928 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644830933 |
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| Product | outer-membrane lipoprotein carrier protein |
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| Protein accession | YP_002982097 |
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| Protein GI | 241663737 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.100483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.437177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTGTGT TGAAAGCACG TCACCTGATG GCCGCCGGGC TGGTCTCGCT GGCAGCATGG
TCTGCCGGCG CCTATGCAGG TGCGGTCGAA CAGCTCAACG CGTTCGTGAG CAATGTCAGC
ACCGCGCGCG GCGAGTTCGT GCAGCGGCAA GTGAAGGGCG GCACCAACGG CAGCCCGCTG
CGCGTTGCCG GGACGTCCAA CGGCGATTTC GTTTTCTCGC GCCCGGGGCG CTTCGTCTGG
CGCTATGTGA AGCCCTACGA ACAGCAGCTC TCGGCCGACG GCCAGACGCT CTACATCTTC
GACAAGGACC TGAACCAGAT CACGGAGCGC AAGCTCGATG CGTCGCTGGG CTCCAGCCCG
GCCGCCATCC TGTTCGGCAG CAACGATCTG GCGAAGAATT TCACGCTCAA GGAAGGTGGT
ACCAAGGACG GCATCGATTG GGCTGAACTC ACCCCCAAGG CCAAGGACAC CCAGTTCGAG
CGCATCGCCA TCGGTTTTCG CAGCGGCGAG CTGCAGGGGA TGGAGTTGCG CGACGCCTTC
GGGAACACCA CCCTGCTGAC GTTCTCGAAC ATCCAGAAGA ATCCGCAACT GCCGGCCAAC
GTGTTCCGTT TTACGCCGCC CAAAGGGGCC GACGTCATCA AGCAATGA
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| Protein sequence | MFVLKARHLM AAGLVSLAAW SAGAYAGAVE QLNAFVSNVS TARGEFVQRQ VKGGTNGSPL
RVAGTSNGDF VFSRPGRFVW RYVKPYEQQL SADGQTLYIF DKDLNQITER KLDASLGSSP
AAILFGSNDL AKNFTLKEGG TKDGIDWAEL TPKAKDTQFE RIAIGFRSGE LQGMELRDAF
GNTTLLTFSN IQKNPQLPAN VFRFTPPKGA DVIKQ
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