| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2042 |
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| Symbol | |
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| ID | 8019703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2175176 |
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| End bp | 2177989 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830828 |
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| Product | DNA polymerase I |
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| Protein accession | YP_002981993 |
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| Protein GI | 241663633 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.782294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAAA GTCAAGAAAC GCTGTTGCTC GTCGATGGCT CGAGTTATCT GTACCGTGCC
TATCACGCAC TGCCCGACTT GCGAAACGGA GAAGGGTTTC CTACGGGGGC CATCTACGGC
ATCGTGAACA TGCTGCGCAA ACTGCGCAAC GACTATCCGG CCAAGTATAG CGCTTGCATT
TTCGACGCCA AAGGCAAGAC CTTTCGCGAC GACCTCTATC CGGCCTACAA GGAGCATCGC
GCGCCCATGC CGGACGACCT GCGCGCGCAG ATCGAACCCA TCCACGAAGC CGTGCGGGCA
TTGGGTTGGC CGATTCTGGT GATCGAAGGT GTCGAGGCCG ACGATGTGAT CGGCACCCTG
GCTGAACGGG CTGCTCGCGA AGGCGTTCGC ACCATCGTCT CAACGGGTGA TAAGGACCTC
GCCCAACTGG TGAATGACCA CGTGACGCTG GTCAACACCA TGACCAACGA AACGCTCGAC
CCGGCCGGCG TGCAAGCGAA GTTCGGCGTG CCGCCGGAGC GCATCGTCGA CTATCTCTCT
CTGATTGGCG ACACCGTGGA CAACGTGCCG GGTGTGCCCA AGGTGGGCCC GAAGACCGCG
GTGAAATGGC TGACGGAATT CGGCTCGCTC GACAACGTCA TCGCGCGTGC AGGCGAGATC
AAGGGCGTGG TGGGCGAGAA CCTGCGCAAC ACGCTCGAGT GGCTGCCCAA GGGCCGCGAA
CTGCTGACGG TGAAGCTCGA CTGCGACCTC AGCAAAGAGG TGCCGACATT CGATGCACTG
ATCGACGGCG GCGAAGACAA ATCCAAGCTC GTCGATTTCT TCTCGCGTTA TGGTTTCAAG
ACGTGGCTGC GCGAGGCTTC TGGCGAGGCC CTGCCCGATA CGCGCAGCGT GGGTGCCGCA
CGCAAGGCTG CAACGCCCGT GAAGAATTAC GCCGGCGAGG CGGCACAACT GCAAGCACAG
GCCAACCTGT TCGATGTGGA AGCGCCGCCC GATGAGATCA AGTACGAGAC GGTGACGACC
GAGGCGCAGC TTGAATCGTG GATGCAACGC CTGGACGAAG TGGATCTCGT CTGCATCGAT
ACCGAGACGA CGTCCATTGA CCCGATGCTC GCGCAGTTGG TGGGGATTTC GCTGTCGGTC
AAGCCGGGCG AGGCTTGCTA CATTCCGGTG GCGCATCGCG GGCCGGATGT GGCCGGGCTC
GATGCAGCGG CGCAGCTCTC GCGCGACACC GTGCTCGCGC GCATGAAGCT GTGGCTCGAA
GACGAATCAC GCAAGAAGGT CGGCCAGCAC CTGAAGTACG ACGCGCATGT GTTTGCCAAC
CACGACATCG CGCTGCGCGG CATCGAGCAC GACACGATGC TCGAATCGTA TGTGCTGGAG
TCTCACCGCA ATCACGGCAT GGATGCACTG GCCGAGCGGG TGCTGCATTT GAAGACGATC
ACTTACGAGG CCGTGTGCGG CAAGGGCGCA TCGCAGATCG GCTTTGACGA GGTGCCGCTC
GATCGCGCGA CCGCGTACGC GGCGGAAGAC GCCGATGTCA CGCTGCGCCT GCATCGCACG
CTGTTCCCCA AGGTGGCCGA AGACGACAAG CTGCGCTACG TCTACGAGCA GATCGAAATG
CCCACCTCCA TCGTGCTGCA GAAGATGGAG CGCAACGGCG TGCTGATCGA TGCCGACCGG
CTGGCCAAGC AGAGCAACGA GCTGGGCTTG CGTCTGATCG AGCTGGAAGC CGAGGCGCAC
AAGCTTGCCG GTCAGCCGTT CAACCTCGGT TCGCCCAAGC AGATCGGCGA CATCTTCTTC
AACCAGATGA AGCTGCCGGT CATCAAGAAG ACCGCGAGCG GTGCGCCGTC GACCGACGAA
GAGGTGCTGC AAAAGCTGGC CGAAGACTAT CCGCTGCCGA AGCTGCTGCT CGACTACCGG
GGCCTGGCCA AGCTCAAGTC GACCTACACC GACAAGCTGC CGAAAATGGT CAACCCGCGC
ACCGGGCGGG TCCACACCAC CTACGGTCAG GCGACGGCGG TGACGGGGCG TCTGGCCTCG
ACCGATCCGA ACCTGCAAAA CATTCCGGTG CGTACGGAAG AGGGGCGGCG CATTCGGGAA
GCATTCATCG CACCGGAGGG CAGCGTCATC GTATCGGCCG ACTACTCGCA GATTGAGCTG
CGCATCATGG CGCATCTGTC GCAGGACGAA GGCCTGATGC GCGCATTCCG TGAGGGCCAG
GACGTGCACC GCGCCACGGC CGCCGAAGTG TTCAACGTGA CGCCGCTGGA GGTGACGCCG
GACCAGCGCC GCGTGGCCAA GGTCATCAAC TTCGGTCTGA TCTACGGCAT GAGCGCGTTT
GGACTCGCCA GCAACCTGGG CATTGGACGA GACGCCGCCA AGCTTTATAT CGACCGTTAC
TTCGCCCGCT ACCCCGGCGC CGCGAACTAC ATGGAAGAAA CCCGCCAGAG CGCGCGCGAG
CATGGCTACG TGGAAACGGT CTTCGGCCGT CGCCTGTGGC TGCCGGACAT CAACGGCGGC
AACGGCCCGC GCCGCCAGGC TGCAGAACGC GCCGCCATTA ACGCGCCCAT GCAGGGCACG
GCGGCTGACC TGATCAAGCT GTCGATGCTG GCAGTGCAAG GCTGGCTCGA AGCCGAAGCG
ATGCGCTCGC GCCTGGTCAT GCAGGTGCAC GATGAATTGG TACTGGAAGT CCCGCAGGAC
GAGCTTGCAG TGGTGCGCGA GCGCCTGCCG GAGTTGATGT GCAGTGTCGC AACGCTGCGC
GTACCCCTGG TGGCCGAAGT CGGCGTAGGC GCGAACTGGG AAGAAGCACA CTGA
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| Protein sequence | MSESQETLLL VDGSSYLYRA YHALPDLRNG EGFPTGAIYG IVNMLRKLRN DYPAKYSACI
FDAKGKTFRD DLYPAYKEHR APMPDDLRAQ IEPIHEAVRA LGWPILVIEG VEADDVIGTL
AERAAREGVR TIVSTGDKDL AQLVNDHVTL VNTMTNETLD PAGVQAKFGV PPERIVDYLS
LIGDTVDNVP GVPKVGPKTA VKWLTEFGSL DNVIARAGEI KGVVGENLRN TLEWLPKGRE
LLTVKLDCDL SKEVPTFDAL IDGGEDKSKL VDFFSRYGFK TWLREASGEA LPDTRSVGAA
RKAATPVKNY AGEAAQLQAQ ANLFDVEAPP DEIKYETVTT EAQLESWMQR LDEVDLVCID
TETTSIDPML AQLVGISLSV KPGEACYIPV AHRGPDVAGL DAAAQLSRDT VLARMKLWLE
DESRKKVGQH LKYDAHVFAN HDIALRGIEH DTMLESYVLE SHRNHGMDAL AERVLHLKTI
TYEAVCGKGA SQIGFDEVPL DRATAYAAED ADVTLRLHRT LFPKVAEDDK LRYVYEQIEM
PTSIVLQKME RNGVLIDADR LAKQSNELGL RLIELEAEAH KLAGQPFNLG SPKQIGDIFF
NQMKLPVIKK TASGAPSTDE EVLQKLAEDY PLPKLLLDYR GLAKLKSTYT DKLPKMVNPR
TGRVHTTYGQ ATAVTGRLAS TDPNLQNIPV RTEEGRRIRE AFIAPEGSVI VSADYSQIEL
RIMAHLSQDE GLMRAFREGQ DVHRATAAEV FNVTPLEVTP DQRRVAKVIN FGLIYGMSAF
GLASNLGIGR DAAKLYIDRY FARYPGAANY MEETRQSARE HGYVETVFGR RLWLPDINGG
NGPRRQAAER AAINAPMQGT AADLIKLSML AVQGWLEAEA MRSRLVMQVH DELVLEVPQD
ELAVVRERLP ELMCSVATLR VPLVAEVGVG ANWEEAH
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