Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2015 |
Symbol | |
ID | 8019675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2142275 |
End bp | 2143756 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644830801 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_002981967 |
Protein GI | 241663607 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.73004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAG CGTCAGAAGC ACCGGCCAAT GAATCGGTGA CATTCGACAG CTTCGGCCTG CATCCGGACG TCCTCCGCGC GCTGACCGAA AGCGGTTACA CCAAGCCCAC GCCCATCCAG GCCGCTGCCA TTCCGGTGGT GACCGCCGGC CGCGACGTCA TGGGCGCCGC ACAAACCGGC ACCGGCAAGA CCGCCGGTTT CTCGCTGCCG ATCATCCATA ACCTGCTGCC GGACGCCAAT ACGAGCGCGT CGCCGGCGCG CCACCCGGTG CGGGCGCTGA TCCTCACGCC CACGCGCGAG TTGGCCGACC AGGTGTACGA CAACGTTGCC AAGTACGCGA AGTACACGGC GTTGCGCAGC GCTGTCGTGT TCGGCGGCGT CGACATGAAC CCGCAGACGG AGCAACTGCG CCGCGGCGTC GAAATCCTCG TGGCAACGCC GGGCCGCCTG CTCGATCACG TGCAGCAGCG CAGCGTGAAC CTGTCGCAGG TGCGCATGCT GGTGCTGGAC GAAGCCGACC GCATGCTCGA CATGGGCTTC CTGCCCGACC TGCAGCGCAT CATCAACCTG CTGCCGGCAC ACCGCCAGAC GCTGTTGTTC TCGGCGACGT TCTCGCCGGA GATCAAGAAG CTGGCCGCGA GCTACCTGCG TCATCCGCAA ACCATTGAAG TGGCACGCAG CAACGCCACG GCAGAGAACG TCCGCCAAGT CATCTACACC GTGCCGGACA ACCACAAGCA GGCCGCGCTC GTGCACCTGT TGAAGCAGCG TGCCGAGCAA GGTCTGCCGC GGCAGTGCAT CGTCTTCTCC AACAGCAAGA TCGGCTGCTC GCGGCTGGCG CGTGCGCTGG AGCGCGAAGG CATCAACGCC AACGCCATTC ACGGCGACAA GACGCAGACC GAGCGCATGC AGACGCTCGA AGCGTTCAAG CAAGGTACCG TCGACGTGCT GGTCGCCACC GACGTGGCAG CGCGCGGTCT GGACATCTCG CAGATGCCGT GCGTGATCAA CTTTGACCTG CCGTTCAACG CAGAAGACTA CGTGCACCGC ATTGGCCGCA CGGGCCGTGC CGGTGCTTCC GGTGACGCAC TGTCGCTGTT CGCGCCGGGC GATGAGCGCC TGCTGGCTGA TATCGAAAAG CTGATCAAGC GCAATCTGCC GCGCGAACAA CTGGCCGATT TCGATCCGAC CGGCGAACAG GCGCGTGACC GTGAGCGCCG CGAGCGCGAC GAAAAGCGTG CCCGCGGCGA GGTCCGCCGG GCCCGTGAGC GAGATGAGCG TAACGGCGCC CGCGTGCTTG ATCACACGAT CGTGCGTCCG GCGTTCCGTC CATCGGACGA TCCGTTTTTC AATCGCCCGT ACGAATCGTC AGTGCCGGCG GAATCGGCGG AGGCCGCCAA GCCGGCACAG CCTGCCGGAC ACCCGCGCAG CGCCAAGCGG CCGATTGCGG CCCTGCTCGG TGGCGTGCCG CGCAAGCGTT AA
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Protein sequence | MSEASEAPAN ESVTFDSFGL HPDVLRALTE SGYTKPTPIQ AAAIPVVTAG RDVMGAAQTG TGKTAGFSLP IIHNLLPDAN TSASPARHPV RALILTPTRE LADQVYDNVA KYAKYTALRS AVVFGGVDMN PQTEQLRRGV EILVATPGRL LDHVQQRSVN LSQVRMLVLD EADRMLDMGF LPDLQRIINL LPAHRQTLLF SATFSPEIKK LAASYLRHPQ TIEVARSNAT AENVRQVIYT VPDNHKQAAL VHLLKQRAEQ GLPRQCIVFS NSKIGCSRLA RALEREGINA NAIHGDKTQT ERMQTLEAFK QGTVDVLVAT DVAARGLDIS QMPCVINFDL PFNAEDYVHR IGRTGRAGAS GDALSLFAPG DERLLADIEK LIKRNLPREQ LADFDPTGEQ ARDRERRERD EKRARGEVRR ARERDERNGA RVLDHTIVRP AFRPSDDPFF NRPYESSVPA ESAEAAKPAQ PAGHPRSAKR PIAALLGGVP RKR
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