Gene Rpic12D_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2014 
Symbol 
ID8019674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2141292 
End bp2142227 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content66% 
IMG OID644830800 
Productglutamyl-Q tRNA(Asp) synthetase 
Protein accessionYP_002981966 
Protein GI241663606 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCCAAG CCAATCTCGA TTTTTCGGAA TCCACCACGT CGTCGCGCGG CCAATACCGT 
GGCCGCTTTG CGCCCTCTCC CACGGGGCCG TTGCATATCG GCTCGCTGGT CACCGCATTG
GCAAGCTGGC TGGATGCGCG CGTACACGGC GGCACGTGGC TCGTGCGCAT CGAAGACATC
GATTTCCAGC GCAATGTGCC CGGCGCCGAT CGCGACATCC TCGCTACGTT GGAAGCGCTC
GGGCTCATTC CGGACGAAGC CCCGCAGTGG CAGAGCACGC ACCTCCCGCG CTTTGAGCAG
GCACTTGCGC AACTGCAGGC CGTCGGCAGC CTCTACCCGT GCGGCTGCAC GCGCCGCGAA
ATCGCGGATT CCGTCACCAG CATCGACGCC AACGGGCACG TGCGTCACCA GACGCTCATT
TATCCCGGCA CATGCCGCAA CGGGCTGCAC GGCCGTCCGC CGCGCGCATG GCGCGTGCGT
GTGCCCCATG CCGATGCCGC TACGCTCTGC TTCAACGACC GCTGGCAAGG CACGCAATGC
CAGAACCTGG CTGAAGCTGT CGGCGATTTT GTTCTCAAGC GCGCCGACGG TATGTGGGCG
TACCAGATTG CAGTCGTGGT GGACGATGCC ACGCAAGGCA TCACGGACGT CGTGCGCGGC
GCCGACCTTC TCGACTCGAC GCCACGCCAG ATTTATCTGC AACAGTTGCT CGGTCTGCCC
GCGTTGCGCT ACCTGCACGT GCCGGTCGTG GTGAACCCCG ATGGTGAGAA ACTCAGCAAG
CAGACCGGCG CGCGTGCCAT CAACCGCAGC CAGCCGCTGG GCGCGCTCAC CGAGGCGGCG
CGGCACCTCG GGCTGGAGAT TCGTGCAGGG GATGTGGAAG GGTTCTACCG GGACGCCGTC
CCGGCGTGGG CCAATCGCCT GGCGCAGCTG GCCTGA
 
Protein sequence
MSQANLDFSE STTSSRGQYR GRFAPSPTGP LHIGSLVTAL ASWLDARVHG GTWLVRIEDI 
DFQRNVPGAD RDILATLEAL GLIPDEAPQW QSTHLPRFEQ ALAQLQAVGS LYPCGCTRRE
IADSVTSIDA NGHVRHQTLI YPGTCRNGLH GRPPRAWRVR VPHADAATLC FNDRWQGTQC
QNLAEAVGDF VLKRADGMWA YQIAVVVDDA TQGITDVVRG ADLLDSTPRQ IYLQQLLGLP
ALRYLHVPVV VNPDGEKLSK QTGARAINRS QPLGALTEAA RHLGLEIRAG DVEGFYRDAV
PAWANRLAQL A