| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2009 |
|---|
| Symbol | |
|---|
| ID | 8019669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2137822 |
|---|
| End bp | 2138685 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644830795 |
|---|
| Product | rhodanese superfamily protein |
|---|
| Protein accession | YP_002981961 |
|---|
| Protein GI | 241663601 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1054] Predicted sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.807914 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.757941 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGGC AGCACATGCA GATCGTCAAT ATTTCCGCTT ACAAATTTGT CACCCTCGAT
GACCGCGAAA CCCTGCGCCC CGCTCTGCTG GCCGAGTGCC AAGCGCGCGA GCTGAAGGGC
ACCGTGCTGC TGGCGCCCGA GGGCATCAAC ATCTTCCTGG CCGGCTCGCG CGAGGGCATT
GACGGTATCG TTGGCTGGCT GCGCGCCGAC CCGCGTTTTG CCGACCTGGC ACCGAAAGAA
AGCCTGTCCG ACCACCAGCC GTTCCGCCGC CTGCTGGTGC GCATGAAGAA AGAAATCATC
ACCATGCGCC ACCCGCTGAT CCGCCCGGAA GAGGGGCGCG CGCCGTCGGT CGCGCCGCCG
GACCTCAAGC GCTGGCTCGA TCAGGGCCAC GACGACGAGG GCCGCCCGGT GGTGATGCTG
GACACGCGCA ACGACTATGA AGTCGCCGTG GGCACCTTCA AGAACGTCGT CGAATACAAC
CTCAAGAAGT TCACTGAGTT TCCGCCCGCC ATTGCCGCGC ACAAGGACGA CTTTGCCGGC
AAGACCGTCG TGTCGTTCTG CACCGGCGGC ATCCGCTGCG AAAAGGCCGC GATCCACATG
CAGGAGATCG GTATCGAGCG CGTCTATCAG CTCGAAGGCG GCATCCTGAA GTACTTCGAG
GAAGTCGGAG GCGCGCATTA CGACGGCGAT TGCTTCGTGT TCGACCACCG CACAGCGCTC
AACGCCGAAC TGCTGCCGGC GGGACCAAAG CAATGCTTCG CCTGCCGCGC CGTGGTGACG
CCGGAAGAGC AGCAGTCCCC GGACTACATC CCCGGCCAGC GCTGCCCCCA TTGCGCAGGC
AACCAAACCC GCGCCGCTGC ATGA
|
|---|
| Protein sequence | MARQHMQIVN ISAYKFVTLD DRETLRPALL AECQARELKG TVLLAPEGIN IFLAGSREGI
DGIVGWLRAD PRFADLAPKE SLSDHQPFRR LLVRMKKEII TMRHPLIRPE EGRAPSVAPP
DLKRWLDQGH DDEGRPVVML DTRNDYEVAV GTFKNVVEYN LKKFTEFPPA IAAHKDDFAG
KTVVSFCTGG IRCEKAAIHM QEIGIERVYQ LEGGILKYFE EVGGAHYDGD CFVFDHRTAL
NAELLPAGPK QCFACRAVVT PEEQQSPDYI PGQRCPHCAG NQTRAAA
|
|---|
| |