| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1999 |
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| Symbol | |
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| ID | 8019659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2124130 |
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| End bp | 2125719 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644830785 |
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| Product | benzoylformate decarboxylase |
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| Protein accession | YP_002981951 |
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| Protein GI | 241663591 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.563871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA CCTCGCTGGC GCTGACCACC GTGCGCGACG CCACCATCGA GCTGCTGCGC
CGGCTCGGCA TGACGCACGT GTTCGGCAAC CCCGGCTCGA CCGAGCTACC GATGTTTCGC
GATTTTCCGG AGGACTTCCG CTACATCCTC GGCTTGCAGG AAGCCGTGGT CGTGGGCATG
GCAGACGGCT TTGCGCAGGC TACCGGCAAC GCGGCGCTGG TGAATCTGCA CTCGGCGGCC
GGTGTCGGCA ACGCCATGGG CAACATCTTC ACGGCGTTCA AGAATCGCAC GCCCCTGGTG
ATCACCGCCG GGCAGCAGGC ACGCTCCATC CTGCCGTTCG ATCCGTTTCT CGCGTCCAAT
CAGGCGACCG AGCTGCCCAA GCCGTACGTC AAATGGAGCA TCGAGCCCGC GCGTGCACAA
GACGTGCCGC TGGCGCTAGC CCGCGCGTAT CACATCGCGA TGCAGGAGCC GCGAGGCCCG
GTGCTGGTAT CCATTCCCGT GGATGACTGG GACCAGCCGA CGGAACCCGT CGCCGTGCAC
GAAGTGGCCA CCGCGGTGCG GCCCGATCCG GTCACGCTGG CGCGCATCGG CGACGTGCTC
GACGCGGCAC AGCGGCCGGC GTTCGTGGTG GGGGCTGCCA TTGACCGCGC TGGCGCGTGG
GACGCCGTCG TGCAACTCGC CGAGAGGCAT AACGCGCGCG TATTCACGGC ACCGATGGCC
GGGCGTGGCG CGTTTCCCGA AGACCACCGC CTGTTCGCCG GCTTCTTGCC CGCGATGCGT
GAAAAAATCG TCAGCCTGCT GCAGGGGCAC GACGTGGTGT TTGCGCTCGG CGCCCCTGCG
TTTACGTACC ACGTGGAAGG CCATGGGCCG CATGTGCCGG TCGGGGCGAA GCTCGTGCAG
TTGATCGACG ATCCAGCGAC CGCTGCCTGG ACGTCCGAAG GCATTTCCGC CGTGGGCAAC
ATGCGTCTGG GCGTGCTGGA TTTGCTCGCT CGCCCCGCGC CACCGGCTCG GCCGGCGCCG
CCACCCCGCG TCAAATCGCC GCGCGCTGAG CCGGGTTCGC CCATGTCGGT TGCGTTTGCG
TTACAGACGC TCGATGCCGT GCGCGGCCCG GCGGACATCG TCGTCGAAGA GGCGCCGAGC
GCCCGATCGA CCATGCAGGC CTACTTGCCG ATGCGCCGCG CTGGCGCGTT CTACACCATG
GACAGCGGCG GATTGGGCTA CGGCATGCCG GCCGCTGTCG GCGTGGCACT TGCTAGACCT
GGCACACGCG TGATCGGCCT GATTGGCGAT GGATCGAGCA TGTATTCGAT CCAGGCGCTG
TGGAGCGCGG CGCTGCTCAA GTTGCCCATG ACGTTCGTGA TCCTGAACAA CCGCCGCTAT
GCTGCCTTGC AGGATTTCGC ACCGGTGTTC GGCTTTGCGC CCACCGATGC GGTGCAGGGC
ACGGATCTGC GCGGCATCGA CTTTGTCGGC CTGGCCCACG CCATGGGCTG CACCGGTCAG
CGCGTGAGTG ACCCCCATGC GCTGGAGGCT GTGCTGCGCC GCGCCCTGCA ATCCACCGGA
CCAACCTTGA TTGAAGTGGA GATCGCTTGA
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| Protein sequence | MTRTSLALTT VRDATIELLR RLGMTHVFGN PGSTELPMFR DFPEDFRYIL GLQEAVVVGM
ADGFAQATGN AALVNLHSAA GVGNAMGNIF TAFKNRTPLV ITAGQQARSI LPFDPFLASN
QATELPKPYV KWSIEPARAQ DVPLALARAY HIAMQEPRGP VLVSIPVDDW DQPTEPVAVH
EVATAVRPDP VTLARIGDVL DAAQRPAFVV GAAIDRAGAW DAVVQLAERH NARVFTAPMA
GRGAFPEDHR LFAGFLPAMR EKIVSLLQGH DVVFALGAPA FTYHVEGHGP HVPVGAKLVQ
LIDDPATAAW TSEGISAVGN MRLGVLDLLA RPAPPARPAP PPRVKSPRAE PGSPMSVAFA
LQTLDAVRGP ADIVVEEAPS ARSTMQAYLP MRRAGAFYTM DSGGLGYGMP AAVGVALARP
GTRVIGLIGD GSSMYSIQAL WSAALLKLPM TFVILNNRRY AALQDFAPVF GFAPTDAVQG
TDLRGIDFVG LAHAMGCTGQ RVSDPHALEA VLRRALQSTG PTLIEVEIA
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