Gene Rpic12D_1989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1989 
Symbol 
ID8019649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2113658 
End bp2114926 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content66% 
IMG OID644830775 
Productphosphoribosylamine--glycine ligase 
Protein accessionYP_002981941 
Protein GI241663581 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0151] Phosphoribosylamine-glycine ligase 
TIGRFAM ID[TIGR00877] phosphoribosylamine--glycine ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.187802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTGA TGGTGGTCGG TTCGGGCGGT CGAGAGCACG CCCTGGCATG GAAGCTGGCA 
CGCTCGCCCA AGGTACAGGT GGTGTATGTG GCCCCCGGCA ACGGCGGCAC GGCGCTGGAC
AAGCGCCTGC AAAACCTCCC GATCACGGAT CCGGAAGTGC TGGCCGCCTT TGCCGAGCGC
GAAGGCATCC ACTTCACGGT GGTCGGCCCG GAAGCACCGC TGGCCGCCGG TATCGTCGAC
CTGTTCCGCG CCAAGGGCCT GCGCATCTTC GGGCCCACCA AGGCCGCGGC GCAGCTCGAA
TCGTCGAAGG ATTTCGCCAA GGCGTTCATG CACCGCCACG GCATTCCGAC TGCCAAGTAC
CAGACCTTCG GCGATGCTGC ACAGGCACAT GCGTACGTTG ACCAGGAAGG GGCCCCGATC
GTCATCAAGG CCGATGGCCT GGCCGCCGGC AAGGGCGTGG TCGTAGCCAT GACGGCCGAA
GAGGCGCACA GCGCCATCGA CATGATGCTG GCCGACAACC GCCTGGGCGA CGCCGGTGCG
CGTGTGGTGA TCGAAGAATT CCTCGCCGGC GAAGAAGCGA GCTTCATCGT CGTGTGCGAC
GGCAAGAACG TCGTCGCGCT GGCCACTAGC CAGGACCACA AGCGCCTGCT CGACGGCGAC
GCCGGCCCCA ACACGGGCGG CATGGGCGCC TACTCGCCCG CGCCGGTGGT CACGCCCACG
CTGCACGCCC GTGCGCTGCG CGAAATCATC CTGCCGACCA TCCGCGGTAT GGAAAAAGAC
GGCATTCCGT ACACCGGCTT CCTGTATGCC GGCCTGATGA TCGACGCAGA CGGCAATCCC
AAGACGCTCG AATTCAATTG CCGCATGGGC GACCCGGAAA CGCAGCCCAT CATGGCGCGC
ATGAAGACCG ACCTGTACGA CGTGCTCGAC CGCGCCATCG ACGGCAAGCT TGACGGCATG
GAGCTGGACT GGGATCGCCG CACCGCGCTG GGCGTGGTGA TGGCCGCGCA CAATTACCCG
GACACACCGC GCAAAGGCGA CGTCATCACC GGCATCCCGA AGGAAACCGA AGACAGCGTC
ACCTTCCACG CAGGCACCAC GCTCAAAGAC GGCGTGCTGA CCACCAACGG CGGCCGGGTG
CTGTGCGTGG TGGGCCTGGC CGATACCGTG AAGGCAGCCC AGCGTGCGGC GTACAACGCC
ATCGAGCAGA TCCACTTTGA CGGCGCCCAG TACCGGACCG ATATCGGCCA TCGCGCCATC
CGCCATTGA
 
Protein sequence
MKVMVVGSGG REHALAWKLA RSPKVQVVYV APGNGGTALD KRLQNLPITD PEVLAAFAER 
EGIHFTVVGP EAPLAAGIVD LFRAKGLRIF GPTKAAAQLE SSKDFAKAFM HRHGIPTAKY
QTFGDAAQAH AYVDQEGAPI VIKADGLAAG KGVVVAMTAE EAHSAIDMML ADNRLGDAGA
RVVIEEFLAG EEASFIVVCD GKNVVALATS QDHKRLLDGD AGPNTGGMGA YSPAPVVTPT
LHARALREII LPTIRGMEKD GIPYTGFLYA GLMIDADGNP KTLEFNCRMG DPETQPIMAR
MKTDLYDVLD RAIDGKLDGM ELDWDRRTAL GVVMAAHNYP DTPRKGDVIT GIPKETEDSV
TFHAGTTLKD GVLTTNGGRV LCVVGLADTV KAAQRAAYNA IEQIHFDGAQ YRTDIGHRAI
RH