Gene Rpic12D_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1981 
Symbol 
ID8019641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2105472 
End bp2106452 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content64% 
IMG OID644830767 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_002981933 
Protein GI241663573 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.642936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAG CGAAAGCCAT CCGCATCTTC GAGACCGGCG GTCCGGAGGT GATGCAGTAC 
GTCGATGTCG ATGTGCCCGC GCCCGGCCCC GGCGAGGCCA CCATCAAGCA GCACGCCATC
GGCCTCAACT ACATCGACGT CTATTTCCGC ACGGGGCTGT ATCCGCAGCC GCTGCCGGGC
GGTATCGGCA TGGAAGCCTC CGGGGTGGTG GAAGCGGTGG GCGAGGGCGT GACGCACGTC
AAGCCTGGCG ACCGCGTCGC CTATGCCGGC CGCCCCACCG GTGCCTATGC GGTGGTGCGA
ACCATGCCGG CCGACATTCT GGTGCGCCTG CCGGACACGA TCGACTTTGA AACCGGCGCA
GCCATGATGC TGCAGGGCAT GACCGCGCAA TACCTGCTGC GCGACAGCTA CCGTGTGCAG
CCGGGCGATA CGGTGTTGTT CCATGCAGCC GCAGGCGGTG TGGGTTTGAT TGCGTGCCAG
TGGCTCAAGG CGCTCGGCGC TACCGTCATC GGCACCGTCG GCAGCGATGC CAAGGCTGAA
CTCGCCCGTG CGCACGGCTG CGATCACACC ATCGTCTACA CGCGCGAGAA CTTCACCGAA
CGCGTGCGCG AAATCACTGG CGGCAAGGGC GTGCCGGTGG TCTACGACGG CATTGGAAAG
GACACCTTCA TGGGCTCGCT GGATTGCCTT GCACCGCGCG GGATGATGGT GATATACGGC
AATGCATCGG GCCCGGTGCC CCCGTTTGAC CTCAGCGTGC TGAGCGCAAA AGGCTCGCTC
AAGATCACCC GCCCGACGCT GATGACCTAT ACGGCGCGAC GCGAACTGCT GGAACCGATG
GCGGCAGAGC TGTTTGATGT GGTGGGCAGC GGCAAGGTGA AAATCGAAAT TCACCAACGC
TATGACCTGC AGAACGCGGC GCAGGCGCAC CGCGATCTAG AAGCGCGCAA GACGACCGGG
TCGACGATCC TCTTGCCGTA A
 
Protein sequence
MTQAKAIRIF ETGGPEVMQY VDVDVPAPGP GEATIKQHAI GLNYIDVYFR TGLYPQPLPG 
GIGMEASGVV EAVGEGVTHV KPGDRVAYAG RPTGAYAVVR TMPADILVRL PDTIDFETGA
AMMLQGMTAQ YLLRDSYRVQ PGDTVLFHAA AGGVGLIACQ WLKALGATVI GTVGSDAKAE
LARAHGCDHT IVYTRENFTE RVREITGGKG VPVVYDGIGK DTFMGSLDCL APRGMMVIYG
NASGPVPPFD LSVLSAKGSL KITRPTLMTY TARRELLEPM AAELFDVVGS GKVKIEIHQR
YDLQNAAQAH RDLEARKTTG STILLP