Gene Rpic12D_1974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1974 
Symbol 
ID8019634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2097593 
End bp2098240 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content67% 
IMG OID644830760 
ProductAllophanate hydrolase subunit 1 
Protein accessionYP_002981926 
Protein GI241663566 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGTGCA CGATTCACCG GCTGGGCGAA CTCGCGCTGT TGTGCGAAGT GCCGCCACCG 
GCCACCCTGA ATTGCCAGCA GCGCATCTGG GCCATGGCTT CGCGCGCGTC CAATTGGGCG
GGCGTGGTCG ACGTGGTGCC CGGCATGAAC AACCTCACGC TCGTCTTCGG TCCACTGGCC
GATGCGCAGC GATTGACCAC GCAGCTGCGT GAAGCCTGGG AAGAAAGCCA GGCGCTGGTG
GCCGACGGCA AACTCGTCGA CATCGAAGTC GCCTATGGCG GTGACGAAGG TCCCGATCTG
CGCGAAGTCG CCAAGCACAC CGGCCTGAGC ACGGCCGAAG TCGTGCGCCG CCACACCGCA
CCCGAATACA TCGTCTATTT CCTGGGCTTC CAGCCGGGCT TTGCCTACAT GGGCGGGCTC
GACAAGTCGC TTGCCACGCC GCGTCGCGCC GAGCCGCGTA TGGCCGTGCC GGCCGGTTCG
GTCGGCATCG GCGGCGAGCA GACCGGCATC TATCCGGCCG CATCCCCCGG CGGTTGGCAA
TTGCTCGGCC GCACAGACGC CGCGCTCTTC ATGCCGCAGC GCAATCCCCC CACGCTGCTC
TCGCCTGGAG ACCGCATCCG CTTTGTTGCC TCGAGGGTGC GCGCATGA
 
Protein sequence
MQCTIHRLGE LALLCEVPPP ATLNCQQRIW AMASRASNWA GVVDVVPGMN NLTLVFGPLA 
DAQRLTTQLR EAWEESQALV ADGKLVDIEV AYGGDEGPDL REVAKHTGLS TAEVVRRHTA
PEYIVYFLGF QPGFAYMGGL DKSLATPRRA EPRMAVPAGS VGIGGEQTGI YPAASPGGWQ
LLGRTDAALF MPQRNPPTLL SPGDRIRFVA SRVRA