Gene Rpic12D_1972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1972 
Symbol 
ID8019632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2095787 
End bp2096557 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content66% 
IMG OID644830758 
ProductLamB/YcsF family protein 
Protein accessionYP_002981924 
Protein GI241663564 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATG CACCGGAAGA CAACATCATG ACTGCAATTG ATCTGAACGC CGACCTCGGC 
GAAGGCTGCG ATACCGACGA GGCGCTGCTT GCCCTGGTGA GTTCCGCCAA CATCGCGTGC
GGCTGGCACG CCGGCGACGT CAATACGATG CGACAGACCG TGGGCTGGGC GCTGCGCCAG
GGCGTGTCGA TCGGCGCGCA TCCGAGCTTT CCCGATCGCG AAAACTTCGG CCGCACTGAA
ATGCATCTGC CACCCGATGA AATCTACGCG GGCGTGCTGT TCCAGATCGG TGGGTTGTCA
GCCATCGTGC GGGCGCAGGG CGGCAGGCTG GCCCACGTGA AGGCGCACGG CGCGCTATAC
AACCAGGCTT CGCGTGACCG GCCTCTGGCC GTTGCCATCG TGCGGGCGAT TCGCGATTTC
GATCCGTCGC TAGTGGTGTT TGGCCTGGCG GGCGGTGAGC TGGTCAAGGC TGCACGTGAA
CTCGGCCTGC AGGCCAAGGA AGAGGTGTTT GCCGATCGCG GGTACAACGC GGACGGCTCG
CTCGTCAAAC GCGGTACGCC GGGCGCCCTG ATCGACAGCG AAGATGCCGC GCTGGACCAG
ACGCTGACGA TGGTGCGCGA GCAGCGCGTG AAGGCCATCG ACGGCACGTG GGTTCCGATC
CGCGCGGAAA CGGTTTGTCT GCACGGCGAC GGCGCGCATG CGCTGGCGTT CGCGCGACGC
ATTCGGGAAC GGCTTGGCAG CGAAGGCATC GCTGTTCGCG CCGGCGCCTG A
 
Protein sequence
MPDAPEDNIM TAIDLNADLG EGCDTDEALL ALVSSANIAC GWHAGDVNTM RQTVGWALRQ 
GVSIGAHPSF PDRENFGRTE MHLPPDEIYA GVLFQIGGLS AIVRAQGGRL AHVKAHGALY
NQASRDRPLA VAIVRAIRDF DPSLVVFGLA GGELVKAARE LGLQAKEEVF ADRGYNADGS
LVKRGTPGAL IDSEDAALDQ TLTMVREQRV KAIDGTWVPI RAETVCLHGD GAHALAFARR
IRERLGSEGI AVRAGA