Gene Rpic12D_1971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1971 
Symbol 
ID8019631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2095006 
End bp2095731 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content66% 
IMG OID644830757 
Productprotein of unknown function DUF969 
Protein accessionYP_002981923 
Protein GI241663563 
COG category[S] Function unknown 
COG ID[COG3819] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.988199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTACGG CAGTGAATCT ATGGCCGCTG ATCGGGGTGG TCGTCATCAT CGCGGGGTTC 
ATCCTGCGAT TCAATCCGAT GCTGGTGGTG GCCGTGGCCG CCATCGCCAC CGGTTTTGCG
GCATCGATGT CCATCGAGCA GATCCTGACG GCGATCGGGA CGGGCATCAT CAAGACGCGG
ACGTTGCCGC TGATCATCCT GCTGCCACTC GCGGTGGTGG GTCTGCTCGA GCGGCACGGC
TTGCGTGAAC ACGCGCAGAA CTGGATCTCG CGCATCCAAT CGGCCACGGT TGGCCGCCTG
CTGATCGTCT ACCTCGCCGT GCGCGAGCTG ACGGCGGCGG CCGGTCTGAC GAGCCTCGGC
GGTCATCCGC AGATGGTGCG TCCGCTGCTG GCTCCGATGG CCGAAGGCGC CGCCGAAAAC
CGCTTCGGCA AGCTGCCGGC GCCGGTGCGT GAACGCCTGC TGGCCTTCTG CGCCGCCACC
GACAACGTGG GCCTGTTCTT CGGCGAAGAC ATCTTCGTGG CCTTCGGCGC CATCGCGCTG
ATGCACACGT TCCTGCTCGG CTCGGGCATC GACGTGGAAC CGCTGCACAT TGCGGTGTGG
GGCATCCCGA CGGCGGTCTG CGCGTTCCTG ATCCACTCGG TGCGCCTCAA GCGCCTGGAC
GGCTGGCTTG CCCGTGAAAT GGGTGCCTCC GCTAACACCA ACGCGGCTGC GGCCAAGCAG
GGGTAA
 
Protein sequence
MGTAVNLWPL IGVVVIIAGF ILRFNPMLVV AVAAIATGFA ASMSIEQILT AIGTGIIKTR 
TLPLIILLPL AVVGLLERHG LREHAQNWIS RIQSATVGRL LIVYLAVREL TAAAGLTSLG
GHPQMVRPLL APMAEGAAEN RFGKLPAPVR ERLLAFCAAT DNVGLFFGED IFVAFGAIAL
MHTFLLGSGI DVEPLHIAVW GIPTAVCAFL IHSVRLKRLD GWLAREMGAS ANTNAAAAKQ
G