| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1960 |
|---|
| Symbol | rph |
|---|
| ID | 8019619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2085195 |
|---|
| End bp | 2085911 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644830745 |
|---|
| Product | ribonuclease PH |
|---|
| Protein accession | YP_002981912 |
|---|
| Protein GI | 241663552 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0689] RNase PH |
|---|
| TIGRFAM ID | [TIGR01966] ribonuclease PH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0244748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.445772 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACCCA GCGGCCGCCA GCCCGACCAA CTCCGCCCCG TCACCCTTAC CCGCAACTTC
ACGCGCCACG CCGAAGGCTC GGTACTGGTG TGCTTTGGCG ACACGCAAGT GCTCTGCACG
GCCAGCGTGC TGCCCAAGGT GCCGCCGCAC AAAAAGGGCA GCGGCGAGGG CTGGGTGACG
GCCGAGTACG GCATGCTGCC GCGCTCGACG CACACGCGCT CCGACCGCGA GGCCGCACGC
GGCAAGCAGA CGGGCCGCAC GCAGGAGATC CAGCGCCTGA TCGGCCGCGC GATGCGCTCG
GTGTTCGATC TGCGCGCGCT GGGCGAGCAC ACGCTGCATC TCGACTGCGA CGTGCTGCAG
GCCGACGGCG GCACACGCAC CGCCAGCATT ACCGGCGCGT TCGTCGCGGC ATATGACGCA
GTCTCTGTCA TGCGCGAAAA GGGCCAGCTG GTGGGCAACC CGATCCGCGA TTTCGTGGCT
GCCGTGTCGG TGGGCGTGGT CGACGGCGTA CCGGTGCTCG ACCTCGACTA CCCCGAAGAC
TCGGCGTGCG ATACCGACAT GAACGTCGTC ATGACGGGCA GCGGTGGCTT TGTGGAAGTG
CAAGGCACTG CAGAAGGCAC GCCGTTCTCA CGCGCCGAAA TGGACGCGCT GCTGGGGCTC
GCCGACCAAG GCATCCGCAC GCTGATCGGC CTGCAGAAGC AGGCGCTGGG CCTCTGA
|
|---|
| Protein sequence | MRPSGRQPDQ LRPVTLTRNF TRHAEGSVLV CFGDTQVLCT ASVLPKVPPH KKGSGEGWVT
AEYGMLPRST HTRSDREAAR GKQTGRTQEI QRLIGRAMRS VFDLRALGEH TLHLDCDVLQ
ADGGTRTASI TGAFVAAYDA VSVMREKGQL VGNPIRDFVA AVSVGVVDGV PVLDLDYPED
SACDTDMNVV MTGSGGFVEV QGTAEGTPFS RAEMDALLGL ADQGIRTLIG LQKQALGL
|
|---|
| |