Gene Rpic12D_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1957 
Symbol 
ID8019616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2081969 
End bp2082904 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content65% 
IMG OID644830742 
Producthypothetical protein 
Protein accessionYP_002981909 
Protein GI241663549 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.330049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCACA GCATGACCGG CTACGGCGTC GCCACACGCC AGGCAGCCTT TACCGATGCC 
CATGGCGCCC CCAGCGGCAG CGTCGCCACC GTCTCGGTCG AATTCCGCAC CGTCAACTCG
CGCTTCCTCG ATCTGCTCTT CCGCGCGCCG GAAGAGTGCC GCGCCTTCGA GCCGGCCCTG
CGCGAAATGC TGATGAGCGC GCTTTCGCGC GGCAAGCTGG AATGCCGGAT CAACCTGCAA
CGCCAGGAAG CCGCCAGCGA TGTCGCGGCG CTCAATGTGG AACTGCTGCA ACAGCTGGCG
AAGCTGGAGC AGGCGGTCAC GCGCTACTTG CCGGCATCGG GTTCGCTGCG CATGGGCGAA
ATCCTGCGCT GGCCCGGCGT GCTGGCCGAG CCGCAACTGA CACAAGACAC GCTGCGCGAC
GCCGTGATCG AGGCTGCCAA AGAGGCGCTC AAGCAACTTC TGGAGTCGCG CCGTCGCGAA
GGTGATGCCC TGAAGGCCGT GTTGCTGGAC CGCGCTGACG CGATGCTCGC CATCGTCGAC
AAGCTCACGC CGATGGTGCC GGTGCTGATT CAGCAGCATC AGGACAAGCT GACCGAACGC
CTGCGCGAGG CGTTTGGCCT GGCAGCGCCC GACGGCACGC CGGCACTGAC GCGCGACGAG
CTTTCCGAGC GCATCCGCCA GGAAGCCACC GTCTACGGCA TCCGCATCGA CATCGCCGAA
GAACTCTCGC GCCTCCAGGC GCATCTGCGT GAAACGCGCC ACATCCTGGA GAAGGGCGGC
CAGATCGGCA AACGCCTTGA CTTCATGATG CAGGAGCTGA ATCGCGAGGC GAATACGCTC
GGCTCGAAGG CCGCCGCCAA GGAGCTGGCC GATGCATCGA TGGAACTCAA GCTGCTCATC
GAGCAGATGC GCGAGCAGGT ACAGAATCTC GAATAA
 
Protein sequence
MIHSMTGYGV ATRQAAFTDA HGAPSGSVAT VSVEFRTVNS RFLDLLFRAP EECRAFEPAL 
REMLMSALSR GKLECRINLQ RQEAASDVAA LNVELLQQLA KLEQAVTRYL PASGSLRMGE
ILRWPGVLAE PQLTQDTLRD AVIEAAKEAL KQLLESRRRE GDALKAVLLD RADAMLAIVD
KLTPMVPVLI QQHQDKLTER LREAFGLAAP DGTPALTRDE LSERIRQEAT VYGIRIDIAE
ELSRLQAHLR ETRHILEKGG QIGKRLDFMM QELNREANTL GSKAAAKELA DASMELKLLI
EQMREQVQNL E