| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1919 |
|---|
| Symbol | |
|---|
| ID | 8019576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2036187 |
|---|
| End bp | 2037287 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644830703 |
|---|
| Product | transcriptional regulator of molybdate metabolism, LysR family |
|---|
| Protein accession | YP_002981872 |
|---|
| Protein GI | 241663512 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1910] Periplasmic molybdate-binding protein/domain |
|---|
| TIGRFAM ID | [TIGR00637] ModE molybdate transport repressor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.360263 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.895882 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATTCC AGTTCGAGGT ATTTCCGGTG GTGGGGCCGG ACGACAACCC GCGCGCGAAC
GGCAAGGTGT TCCAGTTGCT GCGGGCGGTG CGAGAGACGG GGTCGCTACA CCGCGCGGCG
AAACAGGTGG GGCTGTCATA CCGGCACGCC TGGGGCGTGA TGCGGTCGTG GGAGGAGATG
CTTGGCCGCG CGCTGCTCGA CATGGAGCGG GGCCGGGGGG CCTCCCTCAC GCTTTTTGGT
GAGCGCATGC TGCGCGCCGA GATGCGCCTG CGCGAGCAGA TCGATCCGGC ACTGCATCAG
GCCATGGGGC AGTTCCTCTC GGAGCTGGAA GACGCATCCC AGTCGCAGGC GCGCATCCGT
TTCTCGGGCA GCCATGACCC CGCCGTGGAG CTGCTGGCCG AGACGTTTGC GCGGCAAAGC
CCCGGCGCGC ACATCGATAC CGTGTTCTGC AGCGCCGTCG AAGGGCTGAT CTGCCTGCAG
GAAAAGCAAT GCGAGGTAGC CGGCTTCTAT GTGGCGCCGC AGCAAGGCGC GGGCTCGATC
GCGCACCAGA CCTTGCGCAA GTGGCTGCGC CCGACCGCCG TGCGCCTGAT CGCCCTGGCC
GATCGCGAGC AGGGGCTGAT GATGTCGGCG GAATGGGCGG GGCGGGTGCA GTCGCTGGGG
GATCTGGCGC GCACGCAGGC GCGCTTCATC AACCGCCAGC GCAGTTCGGG CACGCGGTTG
CTGTTCGATC AGTTGCTGGT GGCAGCCGGG CTGTATCCCG ACCAGATCAA CGGGTACGAC
GAGCAGGAAT TCTCCAGCGA CAAGATCGCC GTGGCCGTGC AGGAAGGGCG GGCGGACGTC
GGCTTCGGCC TGCGCCCTGG CGCCGAAGCG CACGGTCTGC ATTTTGTGCC GCTGACACGC
GAAACGTATT ACCTGGCGGT GCGCCGCAAC GACGCGCTGT CGCCCTGGGT GCGCGAGCTG
ATCGAGCGCA TCGGGCAGCC GGCCTTCCGC GAAGGCCTGG GCCATCTCGC CGGCTACCGG
CCGACCGAGC ACGTTTCGCT GCTCACCGCA GAGCAGGCGC TGCCCTGGCA CGCTGACGAG
GCCCGCGCGC TGGCCCGCTG A
|
|---|
| Protein sequence | MTFQFEVFPV VGPDDNPRAN GKVFQLLRAV RETGSLHRAA KQVGLSYRHA WGVMRSWEEM
LGRALLDMER GRGASLTLFG ERMLRAEMRL REQIDPALHQ AMGQFLSELE DASQSQARIR
FSGSHDPAVE LLAETFARQS PGAHIDTVFC SAVEGLICLQ EKQCEVAGFY VAPQQGAGSI
AHQTLRKWLR PTAVRLIALA DREQGLMMSA EWAGRVQSLG DLARTQARFI NRQRSSGTRL
LFDQLLVAAG LYPDQINGYD EQEFSSDKIA VAVQEGRADV GFGLRPGAEA HGLHFVPLTR
ETYYLAVRRN DALSPWVREL IERIGQPAFR EGLGHLAGYR PTEHVSLLTA EQALPWHADE
ARALAR
|
|---|
| |