Gene Rpic12D_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1897 
SymbolrpsO 
ID8019554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2014950 
End bp2015219 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content59% 
IMG OID644830681 
Product30S ribosomal protein S15 
Protein accessionYP_002981850 
Protein GI241663490 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0184] Ribosomal protein S15P/S13E 
TIGRFAM ID[TIGR00952] ribosomal protein S15, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.320723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.937445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCG CTGACATCAA AAAGCAAGAC ATCGTCAAAG ATAACGGCCG CAGCGCCAAC 
GATACGGGTA GCCCGGAAGT GCAAGTTGCA CTGCTGACCG CTCGCATCAA CGAACTGCAG
CCGCACTTCA AGGCGCACAT GAAGGATCAC CACAGCCGTC GCGGCCTGCT CCGCATGGTG
AGCCGTCGTC GCCGTCTGCT GGACTACCTC AAGAGCAAGG ACGCTGACCG TTACACCGCC
CTGGTTGCGA AGCTGGGTCT GCGTAAGTAA
 
Protein sequence
MSVADIKKQD IVKDNGRSAN DTGSPEVQVA LLTARINELQ PHFKAHMKDH HSRRGLLRMV 
SRRRRLLDYL KSKDADRYTA LVAKLGLRK