Gene Rpic12D_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1875 
Symbol 
ID8019531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1992343 
End bp1992804 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content66% 
IMG OID644830658 
Productprotein of unknown function DUF1178 
Protein accessionYP_002981828 
Protein GI241663468 
COG category[S] Function unknown 
COG ID[COG5319] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.163568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.464761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTGC TGGACCTCCG CTGTGCCAAT GGCCATCGCT TCGAAGGCTG GTTCGGCTCC 
GATGCCGACC TGCAATCGCA GCAAGAACGC GGGCTGTTGA CGTGCCCTGT CTGCGGTCAC
AACGAGGTTG AGCGCTTGCC GAGTGCGCCG CGCCTGAATC TGTCGTCGTC ACGAGCGGAC
GCTGCCCAGA AGGGCCCTGC CGCCCAGACG GCCGGCGGAG ATGGCGGTGC ATCCGCAGCC
CTGCAACAGC TCTACCTGAA AGCCGTGCGC CACGTCCTTG CCAATACCGA AGACGTGGGC
GAGCGGTTTG CAGAAGAGGC GCGCCGCATG CACTACAAGG AGGCGCCGGA GCGGGGTATT
CGCGGGACGA CCTCTCGGGA GGAAGCGCAG GAGCTGGCGG AGGAGGGCAT CGACGTGATG
CCGCTGTTGG TGCCTGACGT GCTCAAGCAG CCCGTGCACT AG
 
Protein sequence
MKVLDLRCAN GHRFEGWFGS DADLQSQQER GLLTCPVCGH NEVERLPSAP RLNLSSSRAD 
AAQKGPAAQT AGGDGGASAA LQQLYLKAVR HVLANTEDVG ERFAEEARRM HYKEAPERGI
RGTTSREEAQ ELAEEGIDVM PLLVPDVLKQ PVH