Gene Rpic12D_1872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1872 
Symbol 
ID8019528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1989354 
End bp1989839 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content62% 
IMG OID644830655 
ProductMaoC domain protein dehydratase 
Protein accessionYP_002981825 
Protein GI241663465 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.760179 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.249536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGA ACGAAAGCGC AGAAGCAACA CGATCGTACG AGTTCTACTT CGATGATTTT 
GAAGTCGGTC GCACGCTGCA GGTGGGCACG TACACGGTCA CCGAAGAAGA GATCCTGACC
TTTGCACGGC AGTACGATCC GCAACCGTTC CACATCGACG CGGAAGCCGC GAAGCACAGC
ATCTACGGCG GCATCATCTC GAGCGGCTGG ATGACGTGCT CGATCATGAT GCGGCTGATG
GTGACCGGCT TCCTCGGCAA GGCGGCGAGC ATGGGCTCCC CGGGTGTGGA TGAAATCCGG
TGGATGAAGC CGGTGTATCC CGGAGACACG CTGTCGGTGT CGAGCACGTG CATGGAAGTG
CGTCCGTCGC AGTCGAAGCC GGACCGTGGC GTGGCGGTCA ACCGTTGGGA AGCGCGCAAC
CAGCGCGGCG AACTCGTCTG TACGGTCACG GGCATGGGCT TGTTTGGCCG GCGCCCGAAG
GCTTGA
 
Protein sequence
MAENESAEAT RSYEFYFDDF EVGRTLQVGT YTVTEEEILT FARQYDPQPF HIDAEAAKHS 
IYGGIISSGW MTCSIMMRLM VTGFLGKAAS MGSPGVDEIR WMKPVYPGDT LSVSSTCMEV
RPSQSKPDRG VAVNRWEARN QRGELVCTVT GMGLFGRRPK A