Gene Rpic12D_1871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1871 
Symbol 
ID8019527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1988837 
End bp1989316 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content62% 
IMG OID644830654 
ProductMaoC domain protein dehydratase 
Protein accessionYP_002981824 
Protein GI241663464 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.544936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.36 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCA TCGAATCGCT CGACGAACTG AAAGGTTTGA TCGGCCAGGA AGTTGCGGTG 
AGTGACTGGA CCGAGATCAC GCAGCAGCAG GTGAACCTCT TTGCCGAGGC CACGGGCGAT
CACCAGTGGA TCCATGTGGA TGTGGAGCGA GCCAAGCGCG AGTCGCCGTT TGGCGCACCG
GTGGCGCACG GCTTTCTGAC GCTGTCGCTG CTGCCGATGC TGATGGCGAA CGCGATCAAA
ATGTCCGACG TGAAAATGGG CGTGAACTAT GGCCTGAACA AAGTCCGCTT TACAGCGCCC
GTGCCGGTGG GCAGCCGTGT GCGTGCCCGC GTGACGCTGG TGGCAATGGA AGCGCTCCCA
CCACTGCCCA ATGCACCGAC GCTGACGGGC GCGCAGATGA CCTGGGCCGT GACCATCGAA
CGTGAAGGGC AGGACCGCCC CGTCTGCGTG GCCGAATCGA TTTCGCGCCG CTATTCCTGA
 
Protein sequence
MRIIESLDEL KGLIGQEVAV SDWTEITQQQ VNLFAEATGD HQWIHVDVER AKRESPFGAP 
VAHGFLTLSL LPMLMANAIK MSDVKMGVNY GLNKVRFTAP VPVGSRVRAR VTLVAMEALP
PLPNAPTLTG AQMTWAVTIE REGQDRPVCV AESISRRYS