| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1844 |
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| Symbol | |
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| ID | 8019500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1963578 |
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| End bp | 1965086 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644830627 |
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| Product | 3-hydroxy-acyl-CoA dehydrogenase |
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| Protein accession | YP_002981797 |
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| Protein GI | 241663437 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.865565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00599728 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAGACTA TCGGGATTGT GGGCACCGGC GCCATGGGGC GAGGCATTGC ACAGATCGCG
GCCCAGGCAG GTTTGCGCGT CAAACTGTTC GACGCCAATC CGCAAGCCGT GGAAGCGGCG
CGCACTGCAC TGGCCGATAC GCTCGCCAAG CTTGCTTCCA AGGGCAAGCT CACAGCGGAT
GACGCCGACG CCACCGTCGC GCGGCTCGTT CCTGCGGGCG CGCTCACCGA TCTGGCCGAC
TGCGATCTCG TGGTCGAGGC CATCGTCGAG AAGCTTGACG TCAAACGCGA CCTCTTCCGT
CAGCTAGAAG ACATCGTCCG CGCGGATGCC ATCCTGGCGT CGAATACATC ATCACTCTCG
ATTACCGCGA TTGCCGCGAC ATGCAAGCAC CCCGAACGCG TCGCGGGCTT TCATTTCTTC
AATCCGGTGC CGCTGATGAA GGTGGTCGAA GTCATCGACG GCCTGCGCAG CGCGCCCGCC
ACCGGTGATG CCCTAGCCGC ACTCGCCCAG CGCATGGGGC ACACCGCCGT GCGCTGCATC
GACATGCCGG GCTTCATCGT CAACCACGCC GGGCGCGGCA TGAATACCGA AGGGCTGCGC
GTGGCGCAGG AAAGTGTGGC GGCCTATGCG GACATCGACG CCATCATGCG CGAGCACGCC
GGCTTCCGCA TGGGGCCGTT CGAGTTGATG GACCTCACAG GGCTGGACGT TTCGCACCCG
GTGATGGAAT CGGTCTACCG CCAGTTCTAC GACGAGCCGC GCTATCGTCC GTCGCAGATC
ACAGCGGTTC GCTTTGCTGG CGGCATTCTT GGCCGCAAGA CGGGCGAAGG TTTCTATCGT
TATCCGGATG GACAGAAACA GGTGCCGGCT GAAGCGCCCG CCCCGTCTGC GCGCCCGACT
TCGGTGTGGA TCAGCCGCGC GCATGACGCC GGCCACGCCG CAGCGCAGCG CCTGTTGCTC
GATCTGGGCA TCACGCCCGA AGCCGGTCCC AAACCGTCCG CCGACGCATT GGTCATCGTC
ACGCCGCGCG GGCTGGATGC CACGGCCTGC GTGGCCGCCG AGGGGCTCGA CGCACGCCGC
ACCGTGGCGC TCGACACGCT CTATCCGTTT GCCGCCACCA AGCGCCGCAC GCTGATGACC
ACACCCGCCA CCGATGCGGC CTACCGCGAT GCCGCACACG GCTTGTTCGC CTCCGACGGC
GTGCCGGTCA CGGTGATCCG CGATTCGGGT GGCTTTGTCG CGCAGCGCAT CGTCGCATGC
ATCGTCAACA TCGCGTGCGA TATCGCACAG CAGCGCATTG CCACGCCCAC CGACATCGAC
CTCGCCGTCA CGCTGGGACT CGGTTATCCC AAAGGGCCGC TGGCACTCGG CGATACGCTG
GGCACGAACG CCATCCTGGA AATTCTGCAG AACCTCTACG CGCTCTATGG CGACCCGCGT
TATCGCCCGA GCCCGTGGCT GCTGCGCCGT GCCCGTCTGG GCATGTCGCT GCTCACGCCT
GATGCCTGA
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| Protein sequence | MQTIGIVGTG AMGRGIAQIA AQAGLRVKLF DANPQAVEAA RTALADTLAK LASKGKLTAD
DADATVARLV PAGALTDLAD CDLVVEAIVE KLDVKRDLFR QLEDIVRADA ILASNTSSLS
ITAIAATCKH PERVAGFHFF NPVPLMKVVE VIDGLRSAPA TGDALAALAQ RMGHTAVRCI
DMPGFIVNHA GRGMNTEGLR VAQESVAAYA DIDAIMREHA GFRMGPFELM DLTGLDVSHP
VMESVYRQFY DEPRYRPSQI TAVRFAGGIL GRKTGEGFYR YPDGQKQVPA EAPAPSARPT
SVWISRAHDA GHAAAQRLLL DLGITPEAGP KPSADALVIV TPRGLDATAC VAAEGLDARR
TVALDTLYPF AATKRRTLMT TPATDAAYRD AAHGLFASDG VPVTVIRDSG GFVAQRIVAC
IVNIACDIAQ QRIATPTDID LAVTLGLGYP KGPLALGDTL GTNAILEILQ NLYALYGDPR
YRPSPWLLRR ARLGMSLLTP DA
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