| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1842 |
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| Symbol | |
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| ID | 8019498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1961622 |
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| End bp | 1962794 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644830625 |
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| Product | putative aminotransferase |
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| Protein accession | YP_002981795 |
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| Protein GI | 241663435 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00218837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCACTG TTGAATCGCT CGCACCCATC GCACCGCCGC CGTCGCGGCT GCCGAATGTC
GGCACCACCA TCTTCACCGT GATGTCTGCG CTGGCCGTGG AAAAGCAGGC CGTCAACCTG
GGCCAGGGCT TTCCTGATTT CGATTGCGAC CCGCGCATCG TCGATGCGGT GTCCGACGCC
ATGCGCGCCG GCCTGAACCA ATACCCGCCG ATGACGGGCG TGCCCGCCCT GCGCCAGGCC
ATCGCCGCCA AGATCGCCAA TCTGTACGGC CACGCTTACG ATGCCGACCG CGAGATCACC
ATCACCGCCG GCGCCACGCA GGCGCTGCTG ACGACCGTGC TGTGCTGCGT GCATCCCGGC
GATGAAGTCA TCGTCTTCGA GCCGACGTAC GACAGCTACA TTCCGTCGAT TGAACTGGCG
GGCGGCAAGG TCGTGCCAAT CACGCTGAAC GCGCCGGACT TTCGCATCCC GTTCGACACG
CTGGCGGCGG CCATCACGCG GCGCACGCGC CTGATCATGC TCAACACGCC GCACAACCCG
ACCGGCACGG TCTGGCATGC GGACGACATG CGCAAGCTCG CCGAGATCCT CGCGCCCACC
AACGTGCTGC TGCTCTCCGA TGAGGTGTAC GAGCACATGG TGTACGACGG CGTGCCGCAT
GCCTCGGTGG CGCGCATTCC CGAGCTGGCG CATCGCGCTT TCGTGGTGTC GAGCTTCGGC
AAGACGTATC ACGTGACGGG CTGGAAGGTC GGCTACGTGG CCGCCCCCGC CGCGCTGATG
GCGGAATTCC GCAAGGTGCA CCAGTTCAAC GTGTTCACCG TCAACACGCC GGTGCAGCAC
GGCCTGGCGA ACTACATGGC GGATCCGCGC CCGTATCTGG AGTTGCCGGC GTTCTACCAG
CGCAAGCGCG ACCTCTTCCG CGCTGGGCTG GAGAACACGC GCTTCAAGCT TCTGCCCTGC
CAGGGGACGT ACTTCCAGTG CGTGGATTAC AGCGCAATCT CCGATCTGCC CGAGGCCGAG
TTCGCCAAGT GGCTGACGAG CGAGATTGGC GTGGCGGCAA TTCCCGTGTC GGCGTTCTAC
TCGCAGCCGC ACGAATCGGG CGTGGTGCGC TTCTGCTTCG CCAAAAAAGA CGAAACGCTC
CAGGTTGCGC TGGAGCGTTT GTCGAAGGTG TAA
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| Protein sequence | MTTVESLAPI APPPSRLPNV GTTIFTVMSA LAVEKQAVNL GQGFPDFDCD PRIVDAVSDA
MRAGLNQYPP MTGVPALRQA IAAKIANLYG HAYDADREIT ITAGATQALL TTVLCCVHPG
DEVIVFEPTY DSYIPSIELA GGKVVPITLN APDFRIPFDT LAAAITRRTR LIMLNTPHNP
TGTVWHADDM RKLAEILAPT NVLLLSDEVY EHMVYDGVPH ASVARIPELA HRAFVVSSFG
KTYHVTGWKV GYVAAPAALM AEFRKVHQFN VFTVNTPVQH GLANYMADPR PYLELPAFYQ
RKRDLFRAGL ENTRFKLLPC QGTYFQCVDY SAISDLPEAE FAKWLTSEIG VAAIPVSAFY
SQPHESGVVR FCFAKKDETL QVALERLSKV
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