| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1837 |
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| Symbol | |
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| ID | 8019493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1956482 |
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| End bp | 1958080 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830620 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002981790 |
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| Protein GI | 241663430 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.350378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.136519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAC GTCCCCTCTT GTGTGTTCCC ATCCGCGCCT TGATTCGCAG TTTCGCCGCA
GGCGCATTGG CTGCGGCCGC CGCGATGCCG TTCGCGGCGC AGGCCGACGA CTTGCGCATC
GGCCTGTCCG CCGACGTCAC GTCGATGGAC CCGCAGTGGA ACAACGCCGG CCCCAACAAC
GCCATGGCGC TGCATATCTT CGAGTCGCTG GTCTTTCTCG ACAAGAACGG CCGCTACACG
CCCGGCCTGG CGACCTCGTG GAAACCCGTC GATGCCAACA CGTGGGAGAT CAAGCTCCGC
CCCAACGTGA AGTGGAGCGA CGGCACGCCG TTCACCGGCG AAGACGTGAA GGCATCGATC
GAGCGCCCGG CACGCCTGAC CAACAGCCCG GGTCCGTTCA CGAGCTATAC CAAGTCGATT
ACCGAAGTAC AGATCGTCGA TCCGCTCACG GTGCGCCTGA AATTGTCGAC ACCGAATTAC
GCGAGCATCC CCAACGATCT GAACAGCCTG CCCATTATTC CGAAGAAGGT GGCCAACGCG
CCGCAGGCGG AATTTGATGC GGGGCGCGCC ATGATCGGTA CGGGCCCGTT CCTGTTCGAC
CATTTCACGC GCGGGCAAGA AATCGTCCTG AAGAAGAACC CGCACTACTG GGGCCGCGTA
CCGCAGTGGG ACAAGGTGAC CTTCAAGATC ATCACCGACA ATGCGGCGCG TACAGCCGCG
CTGCTCTCGG GCGATGTGGA TGTCGTCGAG GCCGTACCGG CTGCGGACGT GCCGCGCATC
AAGCAAGACC CGAAGTTCCA CCTCGAACAG CAGGTGTCTT GGCGCACGAT TTTCTGGCAG
ATGGACCAAA GCCGCGATGT GTCGCCGTTC GTGACCGACA AATCCGGCAA ACCGCTGGCC
AAGAACCCAC TCAAGGACCA TCGCGTGCGC GAGGCCATCG CGCTGGCCAT CAACCGCGAT
GCCATCGTCA GCCGCGTGCT CGAGGGCCAG GGCGTGGTGG CCTCGAGCAT CGTGTCACCG
CAGATCTTCG GGCACCCGGG GGGCAAACCG ATTGCTTATG ACCCGGCACG CGCCAAGAAA
CTGCTTGCCG AGGCCGGCTA TCCGGACGGC TTCGGGCTCA CGCTGCACGC CACCAACAAC
CGCTACCTGA ATGACGCGCA AGTCGCGCAA ACTACCGCGC AGCTGCTCAC GCGCATCGGC
ATCCAGACGA AGGTTGAAAC GTTGCCGGTG GCGGCGTATT TCTCGCGCGC GCGTCAGGGC
GAGTTCTCGT TCATGATGCT CGGCTGGGGC TCGGTGGCGG CGGATGTAGC GCTGCGCAGC
ATTCTCGGCA CGCCCAACGC GCAAACCGGT TATGGCTCGT GGAACTGGGG CCGCTACAGC
AACCCGGAAC TCGACAAACT GGTACAGACG TCGCTCTCAA CGGTCTCGAG CGAACAGGCA
CACGAGCAGG CTGCCAAAAC TGCGGCACGC TTTGCGCAGA CGGACTACGC GATCATCCCG
TCGCATCACC AGCTCGCCAC GTGGGCCATG CGCAAGGGCA TCCGCTACGA GGCGCGCACT
GACGAATGGT CGCTCGCGTG GTTGTTCACC AAGCAATGA
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| Protein sequence | MTTRPLLCVP IRALIRSFAA GALAAAAAMP FAAQADDLRI GLSADVTSMD PQWNNAGPNN
AMALHIFESL VFLDKNGRYT PGLATSWKPV DANTWEIKLR PNVKWSDGTP FTGEDVKASI
ERPARLTNSP GPFTSYTKSI TEVQIVDPLT VRLKLSTPNY ASIPNDLNSL PIIPKKVANA
PQAEFDAGRA MIGTGPFLFD HFTRGQEIVL KKNPHYWGRV PQWDKVTFKI ITDNAARTAA
LLSGDVDVVE AVPAADVPRI KQDPKFHLEQ QVSWRTIFWQ MDQSRDVSPF VTDKSGKPLA
KNPLKDHRVR EAIALAINRD AIVSRVLEGQ GVVASSIVSP QIFGHPGGKP IAYDPARAKK
LLAEAGYPDG FGLTLHATNN RYLNDAQVAQ TTAQLLTRIG IQTKVETLPV AAYFSRARQG
EFSFMMLGWG SVAADVALRS ILGTPNAQTG YGSWNWGRYS NPELDKLVQT SLSTVSSEQA
HEQAAKTAAR FAQTDYAIIP SHHQLATWAM RKGIRYEART DEWSLAWLFT KQ
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