| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1825 |
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| Symbol | sdhA |
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| ID | 8019481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1943464 |
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| End bp | 1945242 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830609 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_002981779 |
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| Protein GI | 241663419 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.231317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.587479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGCAG TCAAGACTGG GCTGCCGCGC CGCAAATTCG ACGTCGTGAT CGTCGGTGCG
GGCGGTTCGG GCATGCGCGC ATCGCTGCAG CTGGCAGAAG CCGGCCTCTC CGTGGCCGTG
CTGTCCAAGG TGTTCCCCAC CCGCTCGCAC ACCGTTGCGG CGCAGGGTGG CATCGGTGCC
TCGCTGGGTA ACATGAGCGA AGACAACTGG CACTATCACT TCTACGACAC CGTCAAGGGT
TCCGACTGGC TCGGCGACCA GGACGCGATC GAATTCATGT GCCGCCAGGC GCCGAACGTG
GTCTACGAAC TGGAACACTT CGGCATGCCG TTCGACCGCA ACGCCGACGG CACCATCTAC
CAGCGTCCGT TCGGCGGCCA TACGTCGAAC TACGGTGAAA AGCCCGTGCA GCGTGCCTGC
GCCGCGGCCG ACCGTACCGG CCACGCGCTG CTGCACACGC TGTATCAGCG TAACGTGCGG
GCCAAGACCC ACTTCTTCGT CGAATGGATG GCGCTGGATC TGATCCGCGA TCAGGACGGC
GACGTGCTGG GTGTGACGGC GCTCGAAATG GAAACCGGCG AGGTCTACAT CCTCGAAGCC
AAGACGACGC TGTTCGCCAC GGGCGGTGCA GGCCGGATCT ACGCGGCTTC CACCAACGCC
TTCATCAACA CGGGTGACGG CCTGGGCATG GCCGCGCGCG CAGGCGTTCC GCTGGAAGAC
ATGGAGTTCT GGCAGTTCCA CCCGACCGGC GTGGCCGGCG CAGGCGTGCT GATCACGGAA
GGCGTGCGCG GCGAAGGCGG CATCCTGCGT AACAAGGACG GCGAGCGCTT CATGGAGCGC
TATGCCCCGA CGCTGAAGGA TCTGGCGCCG CGTGACTTCG TGTCGCGCTC GATGGACCAG
GAAATCAAGG AAGGCCGCGG CTGCGGCCCG AACGGCGACT ACGTGCTGCT CGACCTGACG
CACGTCGGCG CCGAGACCAT CATGAAGCGC CTGCCGTCGA TCCGCGAAAT TGGCCTGAAG
TTCGCCAACG TCGACGCCAT CAAGGAGCCG ATTCCCGTGG TGCCGACCAT CCACTACCAG
ATGGGTGGCA TTCCGACGAA CTATCACGGT CAGGTGGTGG TGCCGAAGAA CGGCAACCCG
AACGAGGTCA TCAACGGTTT CTACGCGATC GGCGAATGCT CGTGCGTGTC GGTGCACGGC
GCGAACCGCC TGGGCACGAA CTCGCTGCTC GACCTGGTGG TGTTCGGCCG TTCGGCGGGC
AACCACATCA TTGCGCAGAA CCTGAAGAAC CGCGAGCACA AGCCGTTGCC GGCCGACGCT
GCCGACCGTG CGCTCTCGCG CCTGGCCAAG CTCGATTCGT CCAGCTCTGG CGAATACGCG
CAGGACGTTG CCAACGACAT CCGTCGCAAC ATGCAGTCGC ACGCTGGCGT GTTCCGTACG
CAGAAACTGA TGGATGAAGG CGTCGAGCGC ATCCTGGAAG TGGCCGAGCG CGCTGGCAAC
ATCCACCTGA AGGACAAGTC CAAGGTGTTC AACACCGCGC GCGTCGAAGC GCTGGAAGTG
GCCAACCTGG TGGAAGTGGC GAAGGCGACG ATGGTGTCGG CTGCCGCCCG CAAGGAATCG
CGCGGCGCAC ACGCCCACAG CGACTTCCCG AACCGCGACG ATGAAAACTG GATGAAGCAC
TCGCTGTGGT ATTCCGAAGG CAACCGCCTG GACTACAAGC CCGTGCAGTT GAAGCCGCTG
TCGGTGGAAT CGGTGCCGCC CAAGGCGCGT ACGTTCTAA
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| Protein sequence | MVAVKTGLPR RKFDVVIVGA GGSGMRASLQ LAEAGLSVAV LSKVFPTRSH TVAAQGGIGA
SLGNMSEDNW HYHFYDTVKG SDWLGDQDAI EFMCRQAPNV VYELEHFGMP FDRNADGTIY
QRPFGGHTSN YGEKPVQRAC AAADRTGHAL LHTLYQRNVR AKTHFFVEWM ALDLIRDQDG
DVLGVTALEM ETGEVYILEA KTTLFATGGA GRIYAASTNA FINTGDGLGM AARAGVPLED
MEFWQFHPTG VAGAGVLITE GVRGEGGILR NKDGERFMER YAPTLKDLAP RDFVSRSMDQ
EIKEGRGCGP NGDYVLLDLT HVGAETIMKR LPSIREIGLK FANVDAIKEP IPVVPTIHYQ
MGGIPTNYHG QVVVPKNGNP NEVINGFYAI GECSCVSVHG ANRLGTNSLL DLVVFGRSAG
NHIIAQNLKN REHKPLPADA ADRALSRLAK LDSSSSGEYA QDVANDIRRN MQSHAGVFRT
QKLMDEGVER ILEVAERAGN IHLKDKSKVF NTARVEALEV ANLVEVAKAT MVSAAARKES
RGAHAHSDFP NRDDENWMKH SLWYSEGNRL DYKPVQLKPL SVESVPPKAR TF
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