| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1791 |
|---|
| Symbol | |
|---|
| ID | 8019447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 1911774 |
|---|
| End bp | 1914095 |
|---|
| Gene Length | 2322 bp |
|---|
| Protein Length | 773 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644830575 |
|---|
| Product | AAA ATPase central domain protein |
|---|
| Protein accession | YP_002981745 |
|---|
| Protein GI | 241663385 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0464] ATPases of the AAA+ class |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.615211 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAG CCAACCTCAA CATGGACGAC GCTGAAGACG ATGGCACGTT CGTCCCCACG
GGCGGCAGGC AGCCGCAGGC GCTGCTGTTG TCCTCGCTCG ATTCCATGTG CGCACAGTTT
GCGTTGCGCA CGGTCTGCAC GATGGGACTG CGCTTCAACC TGCGCACCAA TATCAACGAC
ATCCTCACCG TTTGCGCGCC GGAGCTGATC TGGCCCGTCA CGGTCATCCA GCGCCTGCAG
CGCTTTTTGT CTGCGCGCTG CGCCGACATG CCGGGCTGGC GCGCTGTCGG CAAGCTCGAC
CTGCCCACCT TCATGGACCG CCACGGCCAG TGGAGCAGCG CCTTCGATGA AAGCTCGCTG
TTCTATTACC TGGACGAGTA CGTCAAGCAT CACGCCAAGG ACATGTTCAC GGTGTTCGGC
GCGTCGTGCG ATGCGCTGGG CGAGCGGCTC GCCAGCGAGC GCGTCCTGCT GGTCAGCAAC
ATCGACATGC TGGCCCGTGT GCTGGGCCTG CCACCACACG AACGCGCGCT GCTGCTGTTT
GCGTCCCTGG TGAAGTACAA GCGCGACCTG CGCGCGGTGA TGGTCGACTG CAAGGTCGCG
CACAGCCAGG AAGCGTTCCA GTTGCTCGCG AGCCTGGCGG GGGCCAGCAC GGCCGAAGTT
GCTGCGTCAT TGCGGCCAGG TTCGCGGCTG GAGACGCTGG GGCTGATCGA GCCGCCGCTG
CCCGAAAACA GCGTCACCGA CCTGGGCGAT CTGATGCGTA TCTCCGACCG CCTCCTGCAC
GTGCTGCTGG GCGACTACGC CTGCGAGGCC GACATGATGG CCGTCTTCAC GCGCCCCGCG
CCGTCGACCA CGCTGTCGCA GTCCGACTAT CCGCATGTGG AAACCGATGC GCGCTACCTT
ACGGCGCTGT TGGAGAACGC CTCACAGCAG CGCGCGGCGG GCGTGAACAT CCTGCTGTAT
GGCGCGCCTG GCACCGGCAA GACCGAACTG GCCCGCGTGC TGGCGCGCGA CGCTGGCTGC
GAACTGTACG AGGTGGATTG CCTCGACAAG GACGGCAACA GCCTTACGGG CAAAGACCGC
TATCGCTCGC TGCAGGTGTC GCAGGCGTTC CTGCGCGGGC GGCCCGGCGC GGTGCTGCTG
TTCGACGAGG TGGAGGACGT CTTCCCCGGC CCGACGCGCG AGCTGATGAG CCTCTTTGGC
CACGAAGAGC CGCGTGGCTC CGTCAACGGC AAGGCGTGGG TGAACCAGAC GCTGGAGCAG
AACCCGGTGC CGGTGATCTG GGTGTCGAAT TCCATTCGTC AGATTGACCC GGCGTACCTG
CGCCGCTTCC AGTTCCATCT TGAGTTGAAG GTGCCGCCGC CGACGGTGCG CGAGAGCATC
ATCCGCAAGC ATCTGGAAGG GCTGGAGGTG TCGGACGCCT TCATGGCCAA GTTGGCAGCG
CGCAAGACGC TCACGCCCGC GCAGATCGAT TCTGCCGCAC GCTTTGCGCG CCTGACGCAG
CCGGCAATGG AAGAGCCTGC CGAATCCCTG ATCGAGCGTC AGCTCGACCA CGCAGATCAG
GCGATGGGCC TGCGGCCGGA GGTGCAAGCG CACCGCGTCG TGACCGAATA CAAGCTGGGC
TATCTGAACC TTGAGACACG GTTTTCCGTC GAGCGCATCA TCGAGGCGCT GCGCGCGCGG
CGACGCGGCA CATTGTGTTT CTATGGGCCG CCCGGTACGG GCAAGACGGT GCTGGCCGAG
CACATCGCGG CGCAACTTGA CATGCCGTTG ATGATTCGCC GCGCGTCCGA CTTGATGAGC
AAGTACGTCG GCGAAACCGA GCAGCAGATC GCGGCGATGT TCTCGCGCGC CGAAGAGGAA
CGCGCACTGC TGCTGCTCGA CGAGGCGGAC AGCTTCATGC AGAGCCGCCA GGGCGCTGTG
CGCAATTACG AGGTGTCGGA AGTCAACGAG ATGCTGCAGG GCATGGAGCG CTTTGACGGC
ATCTTCATCT GCACGACCAA TTTGTTTGAT CGGATTGACG AGGCGGCGCT GCGGCGGTTT
GCATTCAAGA TCCGCTTCAA GCCGCTGGTG CGTGCGCAGC GCGAGCAGAT GTTCATTGCC
GAGGCGCTGG GGGGCAAGGC GGAGGCACTC AAGCCTGTGT GGCGCGAGAT GTTGGCGTCT
CTCGACATGC TCACGCCGGG CGACTTTGCG GTGGTCAAGC AGCAGTCTGT GCTGCTGGGC
GAGACGCTTG AACCCGAAGC TTTCCTTGCA CAATTGCGGC AGGAGCATTC CATCAAGCCG
GAACTGCGCG AGCGGCGCTC CATTGGATTC ACACCGCGCT GA
|
|---|
| Protein sequence | MDEANLNMDD AEDDGTFVPT GGRQPQALLL SSLDSMCAQF ALRTVCTMGL RFNLRTNIND
ILTVCAPELI WPVTVIQRLQ RFLSARCADM PGWRAVGKLD LPTFMDRHGQ WSSAFDESSL
FYYLDEYVKH HAKDMFTVFG ASCDALGERL ASERVLLVSN IDMLARVLGL PPHERALLLF
ASLVKYKRDL RAVMVDCKVA HSQEAFQLLA SLAGASTAEV AASLRPGSRL ETLGLIEPPL
PENSVTDLGD LMRISDRLLH VLLGDYACEA DMMAVFTRPA PSTTLSQSDY PHVETDARYL
TALLENASQQ RAAGVNILLY GAPGTGKTEL ARVLARDAGC ELYEVDCLDK DGNSLTGKDR
YRSLQVSQAF LRGRPGAVLL FDEVEDVFPG PTRELMSLFG HEEPRGSVNG KAWVNQTLEQ
NPVPVIWVSN SIRQIDPAYL RRFQFHLELK VPPPTVRESI IRKHLEGLEV SDAFMAKLAA
RKTLTPAQID SAARFARLTQ PAMEEPAESL IERQLDHADQ AMGLRPEVQA HRVVTEYKLG
YLNLETRFSV ERIIEALRAR RRGTLCFYGP PGTGKTVLAE HIAAQLDMPL MIRRASDLMS
KYVGETEQQI AAMFSRAEEE RALLLLDEAD SFMQSRQGAV RNYEVSEVNE MLQGMERFDG
IFICTTNLFD RIDEAALRRF AFKIRFKPLV RAQREQMFIA EALGGKAEAL KPVWREMLAS
LDMLTPGDFA VVKQQSVLLG ETLEPEAFLA QLRQEHSIKP ELRERRSIGF TPR
|
|---|
| |