| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1764 |
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| Symbol | |
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| ID | 8019419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1878988 |
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| End bp | 1880568 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830547 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002981718 |
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| Protein GI | 241663358 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.295464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACCC ACGTGAAACG CCTCCTTGCC TCGTCGCTTG CTGTTGCACT GTTTGCAACT
GCCGGCGCTG TCAGCGCGCA AACCCTGAAC ATCGCCTTTG CCGATCCGCT GTCGTCGCTC
GACCCGCAGT TGAACAATCA CGCAGGCGAC CGCTCCGTCG ACGTGCACTT CTGGGATCTG
CTGGTCGAGA ACAAGTGGAA CAAGCTGCAG CCCGGTTTGG CCCTGTCATG GAAGACGCTG
GACCCGAAGA CGTGGGAATT CAAGCTGCGC CCGAACGTGA AATGGCACGA CGGCCAGCCG
TTCACGGCGG ATGACGTCAT CTTCTCGTAC CAGCGCGCGC GCAGCGTGCC GGGCAGCGTT
GCAACGTTCG CGGGCTATCT GCGCACGGTG GAGTCCGTCA CGGCCAAGGA CCCGCTCACG
CTCATCATCA AGACGACCAT CCCGAGCCCG GACTTGCCGC TGAACCTGGC ATCCGTGCAC
ATCGTCAGCA AGCACGTGGG TGAGAAGTCT TCCACCGAGG ATTACAACGC CGGCCGTGCC
GTGGTGGGTA CGGGCCCCTA CAAGTTCGTC TCGTATGTGC CCGGCGATCG CGTGGTGATG
GCGCGCAACG ACAACTACTG GGGCGACAAG CAGCTCTGGG AGAAGGTCAA CTACCGCTAC
ATCAACAACG CTGCCGCTCG CACGGCCAAC CTGCTTTCAG GCGAAGTCGA TGTCATCGAC
AAGGTGTCGG TGTCTGACCT GGCGCGCCTG CGCCAGTCGC CCAACGTGAA GGTGTTCGCC
TATCCGGGCC TGCGCGTGAT GCTGCTGCAA CCAAGCTTCC GCAAGGGGCC GAACGACTAC
ATCACCGGCA ACGACGGCAA GCCGCTGCCG AACAATCCGC TGCTGGATGT GCGCGTACGC
CGCGCGCTGT CGCTCGCGAT CGACCGGAAA GCGATCGTCG ACCGCATCCT GCAGGGCGCC
GCCACCGTCG CCAACCAATG GATGCCGTCG GACACGTACG GCTACAACCC CGATGTGAAG
GACATCGCTT ACGACCCCGT GCAGGCCAAG AAGCTGCTGG CTGAAGCTGG CTTTCCGCAG
GGCTTCAACC TGGTGATCCA CGTGCCGAAC GACCGCTATC CGCAAGGCCC CGAAACGGCG
CAGGCGGTGG CGCAGTTCTG GACCCGCATC GGCGTAAAGT CGCGCGTGGA AGTGGTGCCC
TGGTCTGTCT ACTCCGGCCG CGCCAACAAG AATGAATATG CGATGAGCAT GCTGGCCTGG
GGCAACGGCA CGGGCGAGGC GAGCTATGCG CTGGTCAACG TGCTCGCCAC GGTCGACACC
AAGAAGGGTC TGGGCGCGTC CAACTGGGGC CACTACAGCA ACGCGGCTGT CGACAACGCA
TTGAACGCCT CCACCGAGGA ATTCAACGTC GAAAAGCGTG CGGCCATCCT GCGCCACTCG
GTCAAGCTGG TCTCGGATGA CGTGGGCGTG ATGCCGCTGT ACCACTACCA GAACGTGTGG
GCCGCCAAGA AGGGCCTGAA GGTGACGCCG ATGACGAGCG ATCGCACAGC AGCCCAAATG
GTCACCAAGG ACGGCAAGTA A
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| Protein sequence | MGTHVKRLLA SSLAVALFAT AGAVSAQTLN IAFADPLSSL DPQLNNHAGD RSVDVHFWDL
LVENKWNKLQ PGLALSWKTL DPKTWEFKLR PNVKWHDGQP FTADDVIFSY QRARSVPGSV
ATFAGYLRTV ESVTAKDPLT LIIKTTIPSP DLPLNLASVH IVSKHVGEKS STEDYNAGRA
VVGTGPYKFV SYVPGDRVVM ARNDNYWGDK QLWEKVNYRY INNAAARTAN LLSGEVDVID
KVSVSDLARL RQSPNVKVFA YPGLRVMLLQ PSFRKGPNDY ITGNDGKPLP NNPLLDVRVR
RALSLAIDRK AIVDRILQGA ATVANQWMPS DTYGYNPDVK DIAYDPVQAK KLLAEAGFPQ
GFNLVIHVPN DRYPQGPETA QAVAQFWTRI GVKSRVEVVP WSVYSGRANK NEYAMSMLAW
GNGTGEASYA LVNVLATVDT KKGLGASNWG HYSNAAVDNA LNASTEEFNV EKRAAILRHS
VKLVSDDVGV MPLYHYQNVW AAKKGLKVTP MTSDRTAAQM VTKDGK
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