Gene Rpic12D_1752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1752 
SymbolpurU 
ID8019407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1867245 
End bp1868111 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content62% 
IMG OID644830535 
Productformyltetrahydrofolate deformylase 
Protein accessionYP_002981706 
Protein GI241663346 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0788] Formyltetrahydrofolate hydrolase 
TIGRFAM ID[TIGR00655] formyltetrahydrofolate deformylase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCACT CCGGTTTCAT TCTTACCCTG TCGTGCCCAG ACCAGCCCGG CATCGTCCAC 
GCCGTGTCGG GCCTGCTGTT CGAACAGGGC TGCAACATTC TCGATTCGGA CCAGTTCGGC
GACGAATTCA CGGGCCGGTT TTTCATGCGC GTGCATTTTG TGCCGCAGGG CCTGCCGCTT
GACCTCGCCA CGCTGCGCGA TCGCTTTGCG CCCATCGGCG AACGTTTCTC CATGCAGTGG
GGCATGTTCG ACGCCGCAGC CAAGCCGCGC GTCATGATCC TGGTTTCGAA GATCGGCCAC
TGCCTGAATG ACCTGCTGTT CCGTGCCCGC GCCGGGCAAC TGCCGATCGA GATTGCGGCC
ATCGTGTCGA ACCACCGCGA TTTTTACCAG CTGGCCGCGT CCTACGACGT GCCGTTCATG
CACCTGCCTT TGCTGCAGGC GACAGACGCG CAGAAGGCCC AGCAGGAAGC GCGCATCTGG
GAGATCGCGC AGGAGCAGCA GATCGACCTG GTCGTGCTCG CGCGCTATAT GCAGATTCTT
TCCGACGACC TGTGCCGCAA GCTCGAAGGC CGCGCCATCA ATATTCACCA CTCATTCCTG
CCCAGTTTCA AGGGCGCCAA GCCGTATTAC CAGGCGCATG AGCGCGGCGT GAAGCTGATC
GGCGCGACGG CTCACTACGT CACTGCCGAT CTCGACGAAG GCCCCATCAT CGAACAGGAA
ATCGAGCGCG TGGACCACAG CATGGACCCG GAGCAGCTCA CCGCCGTGGG CCGCGACGTG
GAATGCGTGG CGCTGGCCCG CGCCGTGAAG TGGCATGCGG AACACCGCAT CCTGCTCAAC
GGCCACAAGA CCGTCGTCTT CAAGTAA
 
Protein sequence
MSHSGFILTL SCPDQPGIVH AVSGLLFEQG CNILDSDQFG DEFTGRFFMR VHFVPQGLPL 
DLATLRDRFA PIGERFSMQW GMFDAAAKPR VMILVSKIGH CLNDLLFRAR AGQLPIEIAA
IVSNHRDFYQ LAASYDVPFM HLPLLQATDA QKAQQEARIW EIAQEQQIDL VVLARYMQIL
SDDLCRKLEG RAINIHHSFL PSFKGAKPYY QAHERGVKLI GATAHYVTAD LDEGPIIEQE
IERVDHSMDP EQLTAVGRDV ECVALARAVK WHAEHRILLN GHKTVVFK