| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1747 |
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| Symbol | |
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| ID | 8019401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1861942 |
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| End bp | 1863495 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644830530 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_002981702 |
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| Protein GI | 241663342 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGACC TCGGCCGCAC ATTTATGCAG AGCGTGGAGC GCAGCCCCCA CGCTCTCGCC
ATAGTCGACG GAGACCTGAA ACTCTCCTAT GCGCAATGGC TGACGCGCAT CCAAAGCGTG
GCCGCAGGCC TGCTTGACCT TGGCCTGCGC CCTGGCGAAC GCCTGCTTGC CATCCTGCAG
AACCGCTGGG AGATGGCGAC CCTCCACTGG GCTTGCCAGT TCACCGGGAT CGTCATCGTC
CCGCTGAATT GGCGCGCCAA GCCGGACGAG CTCGACTATT GCGTACGTGA CGCAGAGGCA
AAAGCATTGG TCTTCGAGCC AGTCAGTGCA GAAGCCGTTC TCGGCAGTCC TGCAGCGATG
AAAATCCTTC GCATCGCACT GGACGGCGCA CGACACTCTT CGCTGTCATT TGACACCCTG
ATGGGCGCCG CACCGCGGCC CGACAGCGTC CTGCCCGAAG CGGATGACGT CTCGCTCATG
TTGTACACAT CAGGCACAAC GGGCCGGCCG AAGGGCGTGC CCCGCCGCCA CAGGCAAGAG
CGCGCCGCCG CGTTGGCGCA CGTCGCTCAG AACCTGTACC GGCGAGGCGA GCGTACGCTC
GGGGTGATGC CGCTGTATCA CACGATGGGC GTGCGCTCCT TGCTGGCGAT GGCACTGGTG
GACGGTCTTT TCGTCTGCGT GCGGCGCTGG AGTCCGTCTC AGACGCTGCA AGCCATCGCT
GATCATCGCG TGACTTGTCT CTACCTCGTC CCCACGCTCT ATCACGACCT GCTGGCCGAT
CCGGGCTTTG ACGCGTTGCG CGTGCGCTCA GTCAGCAAGC TCGGCTTTGC CGGTGCAGCG
ATGAATGATG GTCTCCTGAA GCGGCTGGAG CAGGCGTTCC ACCCAGAGCT GTTCGTTAAC
CACTACGGCT CGTCCGAGGT CTACACGTTC AGCGTCGAAC AGCGCGCGGC GGGCAAGCCT
GGCAGCGCGG GTCGCGCTGG GCTCAATACA CGACTGCGCC TAGTCCGCTT GGACACCGAC
TCGCCGGAAG CGGTGGTGGC CCCTGGCGAA GAAGGGCAGA TCATCGTCGA ACTGCGCGGC
GACGAAGCCT TTGAGGGGTA TTGGAATCGC GACGATGCCA ACGTGAAGTC CCTGCGCCAG
GGCTGGTACT TCACCGGTGA CACCGGCTAC TTCGACGCAG AGGGGGATCT ATTCGTCAGT
GGCCGCGTGG ACGACATGAT CATCAGCGGA GGCGAGAACA TCTCGCCTGC TGATATCGAG
TCGATCCTCT CCCTGCACCC TGCCGTGGAT GAGGTCGCCG TGGCCGGTGT ACCGGACCCG
CGCTGGGGTC AGAAAGTCGT CGCTTTCGTC AAGCCGCACG ACGATGTAAA TGCCAGCACG
CTGGATGCCT ATTGCCGCGA CTCCGAGCTG GCCAATTTCA AGCGCCCGCG CGACTACGTG
TTCGTAGCCG ATATCCCAAA GTCGCCGGTC GGCAAGATCC TGCGCCGCAA GCTCTCGGAG
GGCGAATACA CCGCGCTCCC CTGCCCTTCT TCCCACGATC TGAACAAGGA GTAA
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| Protein sequence | MLDLGRTFMQ SVERSPHALA IVDGDLKLSY AQWLTRIQSV AAGLLDLGLR PGERLLAILQ
NRWEMATLHW ACQFTGIVIV PLNWRAKPDE LDYCVRDAEA KALVFEPVSA EAVLGSPAAM
KILRIALDGA RHSSLSFDTL MGAAPRPDSV LPEADDVSLM LYTSGTTGRP KGVPRRHRQE
RAAALAHVAQ NLYRRGERTL GVMPLYHTMG VRSLLAMALV DGLFVCVRRW SPSQTLQAIA
DHRVTCLYLV PTLYHDLLAD PGFDALRVRS VSKLGFAGAA MNDGLLKRLE QAFHPELFVN
HYGSSEVYTF SVEQRAAGKP GSAGRAGLNT RLRLVRLDTD SPEAVVAPGE EGQIIVELRG
DEAFEGYWNR DDANVKSLRQ GWYFTGDTGY FDAEGDLFVS GRVDDMIISG GENISPADIE
SILSLHPAVD EVAVAGVPDP RWGQKVVAFV KPHDDVNAST LDAYCRDSEL ANFKRPRDYV
FVADIPKSPV GKILRRKLSE GEYTALPCPS SHDLNKE
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