Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1738 |
Symbol | |
ID | 8019392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1849415 |
End bp | 1850074 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644830521 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_002981693 |
Protein GI | 241663333 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0459515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.949758 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTC TGGTAATCGA TAGCTTGCCG CTTTTTGCGG CAGGTGTGTC CAATGTATTG AATGCACTCG ACGCGCAGGG TGTGTTTATC GATACGCACT ACACCGCGCA AATCGGACCG GCTTGCAGGC AAGCCGAACC CACAGCCGTC GTGATGGAAT GGAGCGCAGA GGACGACGAC GCGCGACAAC GTTTATCGGA GTTGAAAGCG GTGCTGCCAG AAGTGCCTGT GTTGCTGACG GTTCAAGCGG TGGGCCGGCA CGTGGTGGGC GACGCGCTGC GCTTCGGCGC CGCCGGCGTG GTCGACCGGC AGGCCACGGC CGATGTCCTG CTGGAGGCCC TGCAGCGCAT TACCTCGGGC GCGGTCTACT TGCCGCCCAT CAGCAATCTC TACCCCGATG ATCCGCGCCA CACCCCTGGA GAGAGCCCGG CCGAAATCTG GCGCCGCCTC ACGCCGCGGC AGCACGAGGT GCTGCAACTG CTTGCAGAAG GCAAATCCAA CAAGCAGATC TGTCGCGTGC TCAACGTGGC TGAGGGCACG ATCAAGAACC ATCTGTACGC GCTGTTCCGG CAGATTGGCG TCAACAACCG GACCGAGGCC GCGCTCTGGC TCTCGCGCTG CAAGGCAAGC CTCGTCCGCC TGCAGATGTG TGCGATGTAG
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Protein sequence | MNILVIDSLP LFAAGVSNVL NALDAQGVFI DTHYTAQIGP ACRQAEPTAV VMEWSAEDDD ARQRLSELKA VLPEVPVLLT VQAVGRHVVG DALRFGAAGV VDRQATADVL LEALQRITSG AVYLPPISNL YPDDPRHTPG ESPAEIWRRL TPRQHEVLQL LAEGKSNKQI CRVLNVAEGT IKNHLYALFR QIGVNNRTEA ALWLSRCKAS LVRLQMCAM
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