| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1731 |
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| Symbol | |
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| ID | 8019385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1844396 |
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| End bp | 1845235 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830514 |
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| Product | hydroxyacylglutathione hydrolase |
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| Protein accession | YP_002981686 |
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| Protein GI | 241663326 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00595225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.648796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCAGG GTGGTGTGCC GCGTGGTGTA GCGCTTGAGG TGGAGGCGAT CGCTGCGTTT
ACCGACAATT ATATTTGGGC ACTACACGAT GGCCGTGTGG CTGCTGTCGT CGACCCGGGC
GACGCGCAAC CGGTGCTGCG CTTCCTGAAG GAGCGCGGGC TCGCGCTCGG TGCCATTGTA
ATCACACATC ATCATGGCGA TCACGTCGGC GGGGTGCGCG AACTGCTTGC CGCGTATCCG
CACAATCCCG AGGGCGCGCC GCTGCCGGTC ATCGGTCCAG CCCACGAATC GATCCCGTGC
CGCACGCAGG CCGTGCGCGA AGGCGACGTG GTGACGCTCG CGCAGCCAGC CGCCACATTC
CGGGTGATCG ATGTACCCGG TCATACCAGC GGTCACGTTG CCTATGTGGG TCAGCTTCAG
GGTAATGCCG CATCGGCGAG CCTGTTTTGT GGCGATACAC TCTTCGCCAC CGGTTGCGGC
CGGCTTTTTG AAGGGACGCC CGCGCAGATG CGCGCGTCGC TGGCAAAGCT GGCGGCATTG
GCGCCCGATA CGCGTGTCTA TTGCGCGCAT GAATACACGG CGTCGAATGT GCGTTTTGCG
CGCGCAGTCG AACCTGGTAA CGCCGACTTG GCAGCCTGGG AGGATGAGGT AACGGCGTTG
CGGGCCGAGG GCCGCTCGAC TGTGCCCACG ACCATTGGCC ACGAGCGGGC GACCAATCCC
TTCATGCGAT CGGATGACGC CAATGTGACG CAGGCCGTGG CACGCCATGC AGGCATCGAC
GCGGATGACC CCGTTGCAGT ATTCGCCGCG TTGCGCCAGT GGAAGAACGA TTTCTGTTGA
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| Protein sequence | MVQGGVPRGV ALEVEAIAAF TDNYIWALHD GRVAAVVDPG DAQPVLRFLK ERGLALGAIV
ITHHHGDHVG GVRELLAAYP HNPEGAPLPV IGPAHESIPC RTQAVREGDV VTLAQPAATF
RVIDVPGHTS GHVAYVGQLQ GNAASASLFC GDTLFATGCG RLFEGTPAQM RASLAKLAAL
APDTRVYCAH EYTASNVRFA RAVEPGNADL AAWEDEVTAL RAEGRSTVPT TIGHERATNP
FMRSDDANVT QAVARHAGID ADDPVAVFAA LRQWKNDFC
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