Gene Rpic12D_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1720 
Symbol 
ID8019374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1829692 
End bp1830489 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content64% 
IMG OID644830503 
Productdihydropteroate synthase 
Protein accessionYP_002981675 
Protein GI241663315 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.270791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.815616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATTC TCAACGTCAC GCCCGATTCG TTCTCCGATG GCGGGCAGCA CGCCACGCGT 
GATGCAGCGT TGCGCCACGC CGAGCAGCTG ATCGCCGAAG GCGTCGATAT GATCGACATC
GGTGGAGAGT CGAGCCGGCC GGGCGCCGAG CCGTTGAGCC TGCAAGCCGA ATTGGACCGC
GTGATGCCTA TCGTCGAGGC GCTACGCGAA TGCGGCAAGC CGCTGTCGAT CGATACCTAC
AAGCCCGAGG TGATGCGGGC CACGCTGGAT GCGGGCGCCG ATCTGATCAA CGATATCTGG
GGCTTTCGCC GGCCCGGCGC GATCGAGGTG GTGGCAAAGG GCAACGCGGG CCTGTGTGTC
ATGCACATGC AGCGCGATCC CGAAACGATG CAAGAAGCGC CCAGCTATGT AGACCTGATG
GGCGAGGTGG AGGTCTTCCT GCGCACGCAG ACGGAGGCGC TGATGGCTGC CGGCGTGGCG
GCCGAGCGTA TCTCCCTTGA TCCGGGGTTT GGTTTTGGCA AGACGCCGGA TCACAACCTC
ACCATGCTCA ATCGCTTGGC GGAGTTTCAG CGCATCGGTT TGCCGTTGCT CGCCGGTTTG
TCGCGCAAGT CGACGCTGGG CGCGGTGTTG GGCGGCAAAC CGCCAGCCGA ACGTGTGACC
GCCAGTGTGG CGGCAGCGCT ACTGGCGGCG GAGCGGGGCG CGTTCATCGT GCGTGTGCAC
GACGTGCAGC CGACCGTGGA GGCAATTCAA CTCTGGTGGG CCATGCGTCA TGAACGCGTA
AATCCGCCAA TGGCCTGA
 
Protein sequence
MGILNVTPDS FSDGGQHATR DAALRHAEQL IAEGVDMIDI GGESSRPGAE PLSLQAELDR 
VMPIVEALRE CGKPLSIDTY KPEVMRATLD AGADLINDIW GFRRPGAIEV VAKGNAGLCV
MHMQRDPETM QEAPSYVDLM GEVEVFLRTQ TEALMAAGVA AERISLDPGF GFGKTPDHNL
TMLNRLAEFQ RIGLPLLAGL SRKSTLGAVL GGKPPAERVT ASVAAALLAA ERGAFIVRVH
DVQPTVEAIQ LWWAMRHERV NPPMA