Gene Rpic12D_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1710 
Symbol 
ID8019364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1817339 
End bp1818877 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content64% 
IMG OID644830493 
ProductPpx/GppA phosphatase 
Protein accessionYP_002981665 
Protein GI241663305 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00230463 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.537787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCCA CCCCCCGTCT GCTGGCTGCT GTCGACATGG GCTCCAACAG CTTCCGGCTG 
ATGATCGGCC GCGTCGACGA AACCCTTGGT GCCAACGGTG CCAGCAGTAC CCAGATCTTC
CAGGTCGATG CGCTGCGCGA ACCGGTGCGT TTGGCTGCCG GGCTTACGCA AGATAAGTAC
CTGGATCAGC CCGCGCGCCG GCGCGGCGTC GACGCCTTGC GCCGCTTTGG CGATCGCTTG
CGTGATTTTG CCCCTGAGCA TGTGCGCGCC GTGGCCACCA ACACCTTGCG TGTAGCCAAG
AACGCGCAGG AATTCCTGAT CGAGGCGGAA GCCGCGCTGG GGTTTCCCAT CGAGGTGATT
GCGGGCCGCG AAGAGGCACG GCTGATCTAT CTCGGTGCAT CGCATGACGC ACCGGCGTGC
CAGGGCAACC GGCTCGTTGT CGACATCGGC GGCGGCTCCA CCGAGTTCAT TATCGGCAAC
GGCTACAAGC CCAAGCTGAT GGAGTCGCTG TATATCGGTT GCGTTTCGCA CAGCCGGCAT
TTCTTCCCCA ACGGCAACGT TGATGAATAC GCGATGAAGC AGGCCGAGCT GGCCGCGCGT
CGCGAGATCC AGGTGCTCGT GCAGCAGTAC CGCACGGCTG GCTGGACGCA GGCCGTCGGG
TCATCGGGGA CGGCGCGTGC GCTGGCCGAG CTGATCGAGC TGAACGGCTT CAATGACAAG
AGCAACGAAC ACGGTATTAC GCGTGAAGGG CTGGAGCGCC TGAAGCGCGC GCTCGTCAAG
TCGGAGAACA CCAACCGCCT GAAGCTCAAC GGCCTGAAGG CGGACCGGAT TCCGGTGCTG
CCGGGCGGGC TGTCGATCAT GCTCGGCGTG TTTGCGGAAC TCGACGTCGA CCGCATGGAC
GTGACCGATG GCGCCTTGCG CCTGGGCGTG CTGTACGACC TGCTCGGCCG TACGCACCAC
GAAGACATGC GCACGGTGAC GATTGAGCAG TTCATGCGCC GCTACAACGT CGATCGAGCG
CAGGCGAGCC GCGTTCGCGA TGCGGCGACC GCGCTGCTGT CGCAGTTTCC CGATCCGCCC
GATGAGCGCC GCGAAGACAA CCTCGCGCTG CTGGGTTGGG CGGCAAACCT GCACGAGATC
GGCATGAGCA TCTCTCACAG CGGGTACCAC AAGCACTCGG CGTACATCGC CAGCCATGCC
GATATGCCGG GTTTTTCCAG GACAGACCAG GCGCGCCTGG CGACGCTGCT GCTGGGCCAC
GCCGGCAAGC TGGGCAAGCT TTCGGGCGGC GGCAAGTTCC TGGATTGGCG GATGCTGTTC
AGCCTGCGTC TGGCGTTTGT GCTGTGCCGC AGGCGCGGAG CGATCCAGTT GCCGGGCTTG
CGCGTGCGCC ATAGCGAAGG CGAACTGAAC GAAGGTGGTT TCGAAGTCGA GCTGCCCAAG
AACTGGATCG AGCAGAATCC GCTGGTGGAA TACAGCCTGA CGAAGGAAGC CGATGAATGG
CAGCGCATCG GCCGCCGCTA CAAGGTGGTG TACGTGTAA
 
Protein sequence
MSPTPRLLAA VDMGSNSFRL MIGRVDETLG ANGASSTQIF QVDALREPVR LAAGLTQDKY 
LDQPARRRGV DALRRFGDRL RDFAPEHVRA VATNTLRVAK NAQEFLIEAE AALGFPIEVI
AGREEARLIY LGASHDAPAC QGNRLVVDIG GGSTEFIIGN GYKPKLMESL YIGCVSHSRH
FFPNGNVDEY AMKQAELAAR REIQVLVQQY RTAGWTQAVG SSGTARALAE LIELNGFNDK
SNEHGITREG LERLKRALVK SENTNRLKLN GLKADRIPVL PGGLSIMLGV FAELDVDRMD
VTDGALRLGV LYDLLGRTHH EDMRTVTIEQ FMRRYNVDRA QASRVRDAAT ALLSQFPDPP
DERREDNLAL LGWAANLHEI GMSISHSGYH KHSAYIASHA DMPGFSRTDQ ARLATLLLGH
AGKLGKLSGG GKFLDWRMLF SLRLAFVLCR RRGAIQLPGL RVRHSEGELN EGGFEVELPK
NWIEQNPLVE YSLTKEADEW QRIGRRYKVV YV