Gene Rpic12D_1700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1700 
Symbol 
ID8019353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1809608 
End bp1810843 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content68% 
IMG OID644830482 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_002981655 
Protein GI241663295 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.167604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCT TCACGCCCCT CGTTCTGCCC AACGGCGCGG TGATCCCAAA TCGCCTTGCC 
AAAGCCGCCA TGGAAGAAAA CATGGCCGAT GCCGATCACG CGCCGTCCGA CGCGTTGCTG
CGCCTGTATG AGGCGTGGGC GGCAGGTGGC GCGGGCTTGA TCCTGACCGG CAACGTGATG
ATCGACCACC GCGCCATGAC CGGCCCGAAC GGCGTCGTCC TCGAAGACGG CGCGCATCTC
GAGCGCTTCC GCCGCTGGGC CCAGGTGGCG CGTGCGCACG GCGCGCATGC GTGGGTGCAG
ATCAACCATC CGGGGCGCCA GATGCCGGCC TCGCTCGGGC AGCCGACGCT GGCGCCCTCG
GCAGTTCCGC TGGCGCTGGG CGCGCTGTCC AAGCAGTTTC CGGTGCCGCG CGAGATGACC
GAGGCGGATA TCGGCGAAGT CCAGCAGCGC TTCACGCGCA GCGCGCAACT GGCCGAGCAG
AGCGGCTTCA CCGGCGTGCA GATCCACGCC GCCCATGGCT ATCTGCTGAG TCAGTTTCTC
TCGCCGATTT CCAACCGGCG GCAGGACCAG TGGGGCGGCC CGATCGAAAA CCGTGCGCGC
CTGCTGCTCG AAATCGTGCG CAGCGTGCGC GCCGCCGTGT CGCCGCAGTT CGTCGTGGCG
GTCAAGCTGA ACTCCGCCGA TTTCCAGCGC GGCGGCTTCA GCCCTGACGA TGCCAAGCAG
GTGGTTGAGC TGCTCAACCC GCTGGGCGTC GACCTTGTTG AACTCTCCGG CGGCAGCTAT
GAGGTGCCCG CCATGCAAGG GCACGCGCGC GACGGCCGCA CGCTCGCCCG CGAAGCGTAT
TTCCTGGAAT TCGCACGGGA CATCGCCACC GTTGCCCGCA TGCCGCTGAT GGTCACGGGC
GGCATCCGGC GCCGGGCCGT GGCGGAGCAG GTGGTCGACA GCGGTGTCGA CATGGTCGGC
ATTGCGACGG CGCTGTCCAT CGATCCAAAC CTGCCGCGCG ACTGGGCTGG CGGCAAGAAC
AACGCGCCCG CGCTGCAGCC CATTACGTGG AAGAACAAGG CGCTGGGGGC ACTGGCCAAC
ATGGCGGTCG TCAAGTTTCA GCTCAACCGG CTGAGCGAGG GGCGCACGAC GGACCCACGC
GTGTCGCCGC TGCGGGCGCT GATTCAGCAG CAACTGGCCG CAGCGTGCCA GTCGCGGCGC
TATCGTCGAT GGACGGCGCA ACGTCAGGCG CGCTAG
 
Protein sequence
MKLFTPLVLP NGAVIPNRLA KAAMEENMAD ADHAPSDALL RLYEAWAAGG AGLILTGNVM 
IDHRAMTGPN GVVLEDGAHL ERFRRWAQVA RAHGAHAWVQ INHPGRQMPA SLGQPTLAPS
AVPLALGALS KQFPVPREMT EADIGEVQQR FTRSAQLAEQ SGFTGVQIHA AHGYLLSQFL
SPISNRRQDQ WGGPIENRAR LLLEIVRSVR AAVSPQFVVA VKLNSADFQR GGFSPDDAKQ
VVELLNPLGV DLVELSGGSY EVPAMQGHAR DGRTLAREAY FLEFARDIAT VARMPLMVTG
GIRRRAVAEQ VVDSGVDMVG IATALSIDPN LPRDWAGGKN NAPALQPITW KNKALGALAN
MAVVKFQLNR LSEGRTTDPR VSPLRALIQQ QLAAACQSRR YRRWTAQRQA R