| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1691 |
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| Symbol | |
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| ID | 8019344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1801639 |
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| End bp | 1802679 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830473 |
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| Product | type VI secretion protein, VC_A0111 family |
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| Protein accession | YP_002981646 |
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| Protein GI | 241663286 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.623686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.90848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCACG GTCGAGATGA TCTTGGGCCT CCGCCCGCGC CCACGCGGCA CACCCACCGT
CACTATGCTG ATCTGCAGCC CTGGAAGCTG AGCTTTCTTG GGCTGTTGCG GGGGTTGTCT
GCGCGCCATG CCACGCTGCC CCGGGTTGGC CGCGCACCCC GCCCGCAGGC GGAGCCCTTC
CGCATCGGGC AAGTGGCTTC ACTCACCTTT GCGCCACGCG AGATTGCGAA GCTGGAGCAG
CGCGCCGATC GTCTGCGTAT CCAATTGTTC GGCTTGGGCA TGTTGGGCCC CAATGGCGCG
CTACCGATCC ACCTGACGGA AATCGTTCGG GAACGCACCG AAGCGCACCA TGACAACACC
ACAGCCGCGT TTCTGGATAT CTTCCACCAT CGGTCGCTAA CGCAGTTCTA TCAGGCTTGG
GCGGGTTCAC AGGCTGCCGC TGGACTCGAC CGGCGTGACG AGGAGGTGTT TTCGCGCTAC
ATCGGCTGGC TGGCGGGGGC CGAGGCCGAT GAAATTTCCG GCAGCGCGCT GCCGCCACAT
GCACGGCTGG CTGCTAGTGC CCATCATGTG CGCGAATCGC GTAGCCCAGA CGGCATCGTG
GCGGCGCTGT CGCACTTCTT TGGGGTGCCG GTGCAGTTAC AGGAGTTTGT GCTGCATTGG
ATCGCCGTGG ATGCTGCCGA GTGCAGCCAC CTGGGCCGCC CAGGCGCGGC CAGCATGATG
GGGCAAGGCG CCTTGCTCGG CGAGGCGGTG CCCGATCGCC AGCACAAGTT CCGGCTCATC
ATCGGGCCGC TCGATCTGCA GAAGTACCTG AACTTCACCC CGAAGGGGCG TGATCTGCCG
GTGCTGGTGG AGTGGGTGCG CAGCTTTGTC AGCTTTGAGT TTGAGTGGGA AGTCGAGTTG
CAGGTGCAAC CGCATTCCGC GCCGCCGGCG GTGCTGGGCG CCCAGGAGCG GCTGGGCTGG
TCGACCTGGC TTGGTCAACC GGACAGTAGC CGTGCCATTA CAGGCATGGT TTTCCAACCT
GAACACTATG TTGCTCAATA A
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| Protein sequence | MFHGRDDLGP PPAPTRHTHR HYADLQPWKL SFLGLLRGLS ARHATLPRVG RAPRPQAEPF
RIGQVASLTF APREIAKLEQ RADRLRIQLF GLGMLGPNGA LPIHLTEIVR ERTEAHHDNT
TAAFLDIFHH RSLTQFYQAW AGSQAAAGLD RRDEEVFSRY IGWLAGAEAD EISGSALPPH
ARLAASAHHV RESRSPDGIV AALSHFFGVP VQLQEFVLHW IAVDAAECSH LGRPGAASMM
GQGALLGEAV PDRQHKFRLI IGPLDLQKYL NFTPKGRDLP VLVEWVRSFV SFEFEWEVEL
QVQPHSAPPA VLGAQERLGW STWLGQPDSS RAITGMVFQP EHYVAQ
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