Gene Rpic12D_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1662 
Symbol 
ID8019314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1766620 
End bp1767444 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content65% 
IMG OID644830443 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002981617 
Protein GI241663257 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.665083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0127757 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATGGA CCGTACAGGG CGAGCGCGCC TACGCCTACA CCGGCGGCAA GCCGTTCAAC 
GCAGAACTGC CGTGCGTCGT ATTTGTGCAT GGCGCGCAGA ACGATCATTC CGTCTGGGGC
CTGCAGACGC GCTGGTTTGC GCACCACGGT TTCAGTGTGC TGGCGGTGGA CCTGCCTGGG
CACGGCCGCA GCGGCGGCGC ACCGCTTGAG ACCGTGGAAG CCATGGCTGA CTGGGTGATG
GCGCTGGTGC ACGCGGCCGG CGTCACGCAG CCGGTGATTG TGGTCGGCCA CAGCATGGGT
TCGCTGATCG CGCTCGAGTG CGCGGCACGG TACGCAGATC GCGTACGCCG CATCGCGCTG
GTGGCAACGG CTTGGCCGAT GAAGGTGTCG GATGCATTGC TGGATGCCGC GCTCAACAAC
ACGGCGGGCG CCATTGAAAT GGTGAATACG TGGTCGCATT CGAGCCTCGC CAACAAGCCC
TCGTCGCCCG GGCCGGGTTT CTGGATGCAT GGCGGCAGTC AGCGGCTGAT GGAACGGGTG
GCGCGCGGTA CCGAGGCGCC CGTGTTTCAC ATGGATTTTG CGGCCTGCAA CGCCTATGCA
CGCGGCGCCG AAGCGATGGC GTCCGTGAAG TGCACATCAC TCGTCATCGT GGGCGAAAAA
GACCAGATGA CGCCAGCGAA AGCTGGACGT CACGTGGCAG CCGGATTGGC CGGCAGCCGT
GTCGTGGGGC TGCCAGGCGG GCACGCGATC ATGGGAGAAT GCCCTGACGG CACACTCGAC
GCGCTGATCG CCTTTGCGCG TGAACGAGAC GCAGTCGCCG CATAA
 
Protein sequence
MEWTVQGERA YAYTGGKPFN AELPCVVFVH GAQNDHSVWG LQTRWFAHHG FSVLAVDLPG 
HGRSGGAPLE TVEAMADWVM ALVHAAGVTQ PVIVVGHSMG SLIALECAAR YADRVRRIAL
VATAWPMKVS DALLDAALNN TAGAIEMVNT WSHSSLANKP SSPGPGFWMH GGSQRLMERV
ARGTEAPVFH MDFAACNAYA RGAEAMASVK CTSLVIVGEK DQMTPAKAGR HVAAGLAGSR
VVGLPGGHAI MGECPDGTLD ALIAFARERD AVAA