Gene Rpic12D_1624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1624 
Symbol 
ID8019274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1728607 
End bp1729416 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content62% 
IMG OID644830404 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_002981580 
Protein GI241663220 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTCG CAACCTGGAA CGTTAACTCT TTGAAGGTGC GCCTACCGCA CGTGCTGCAG 
TGGCTGGCTG AGCGCGAAGC CGACGCCACG CCCATCGATC TGCTCTGCCT CCAAGAGCTC
AAGCTGCCCG ATGACCGCTA TCCGCTCGCC GAACTGGACG CAGCGGGCTA TACGTCGTTG
TTCACAGGCC AGAAGACGTA CAACGGCGTT GCCATCCTCT CGCGCAAGGC CTCTGTGCCA
GAAGGCCGCG ATGTGGTGAA GAACATCCCG GGCTTTACCG ACGACCAGCA GCGCATCGTG
GCCGCCACAT ATGACGTGGA CGGTGGCCCG GTCCGCGTGA TTTCTGCATA TATCCCAAAC
GGACAGGCGC TTGATTCCGA CAAATTTGTC TACAAGCTGC GCTGGCTGGA AGCGCTGCAG
GCGTGGCTGA CGAGCGAGAT GGCAGCAAAC CCGCGGCTGA TGCTGCTGGG CGACTTCAAC
ATCGCCCCGG AAGATCGCGA CGTTCACGAC CCGAAAAAGT GGGAGGGGCA GAATCTGGTG
TCGCCGGAAG AGCGCGCGGC GTTTCGTGCA ATGCAAGCTG CGGGGCTGGT CGATGCCTTT
CGCATGTTCG AGCAGGAAGA CAAGCTGTTT TCGTGGTGGG ACTACCGCAT GTTCGGCTTC
AAGCGCAACG CGGGCCTGCG AATCGACCAC ATCATGCTGT CGCCCGAACT GGCCAAGCTG
TGCGAGTCGT GCCATATCGA TCGGGTGCCA CGCACGTGGG AACAGCCGTC GGACCACACG
CCCGTGGTCG CCGCCTTGCG CAGCGCATAA
 
Protein sequence
MRVATWNVNS LKVRLPHVLQ WLAEREADAT PIDLLCLQEL KLPDDRYPLA ELDAAGYTSL 
FTGQKTYNGV AILSRKASVP EGRDVVKNIP GFTDDQQRIV AATYDVDGGP VRVISAYIPN
GQALDSDKFV YKLRWLEALQ AWLTSEMAAN PRLMLLGDFN IAPEDRDVHD PKKWEGQNLV
SPEERAAFRA MQAAGLVDAF RMFEQEDKLF SWWDYRMFGF KRNAGLRIDH IMLSPELAKL
CESCHIDRVP RTWEQPSDHT PVVAALRSA