Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1608 |
Symbol | |
ID | 8019258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1707089 |
End bp | 1707886 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644830388 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_002981564 |
Protein GI | 241663204 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0247666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.511449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAG CAGACAAGGA CCCCGGCAAG ACGTCTATCC AGGTCATCGA ACGCATGATG ATGCTGCTCG ACGCGCTTGC CGATCACGCC GATCCGGTCA GCCTGAAGGC GCTGTCGGCC AGCACCGGCC TGCACCCGTC CACCGCGCAT CGCATCCTGA ACGACATGGT GGCTTGCCGC TTCGTCGATC GCTCCGACCC GGGCAGCTAC CGTCTCGGCA TGCGTTTGCT GGAACTTGGC AACCTGGTCA AGGCGCGCCT GTCGGTGCGA GAAGCGGCGC TCGCGCCGAT GCGCGCCCTG CACCGACTGA CCGGCCAGAC CGTCAACCTC TCGGTGCGTC AGGGCGATGA GATCGTCTAC ATCGAGCGCG CCTATTCCGA GCGCTCTGGC ATGCAAGTCG TGCGCGCCAT TGGCGGCCGC GCGCCGCTGC ATCTGACTTC GGTTGGCAAG CTGTTCCTGG CTGCTGACGA ACTGGGCCGT GTGCGCGCCT ATGCGACTCG CACGGGCTTG TCTGGCCACA CCCGCACCTC CATCACGGAT TTGCCCAAGC TTGAACGCGA ACTCAACTGG GTGCGCACCA ACGGCTACGC GCGTGACAAC GAAGAACTGG AACTCGGCGT GCGCTGTATC GCTGCCGGCA TCTATGATGA TTCGCGGCGT CTGGTCGCGG GCTTGTCGCT ATCGGCACCG GCAGACCGGT TGCAGGACAG CTGGCTCGAC AACCTCAAAG ACACTGCACT GCAAATCTCC AAAGGGATGG GCTACACGCA CGAGGACGAT ACGGTGCGCG CAGAGTAA
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Protein sequence | MAEADKDPGK TSIQVIERMM MLLDALADHA DPVSLKALSA STGLHPSTAH RILNDMVACR FVDRSDPGSY RLGMRLLELG NLVKARLSVR EAALAPMRAL HRLTGQTVNL SVRQGDEIVY IERAYSERSG MQVVRAIGGR APLHLTSVGK LFLAADELGR VRAYATRTGL SGHTRTSITD LPKLERELNW VRTNGYARDN EELELGVRCI AAGIYDDSRR LVAGLSLSAP ADRLQDSWLD NLKDTALQIS KGMGYTHEDD TVRAE
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