Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1591 |
Symbol | |
ID | 8019239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1689094 |
End bp | 1690206 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644830369 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_002981547 |
Protein GI | 241663187 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.150486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00904495 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAAAATC GCATCAAGCA TTATAGCCCA AGCCCTGTGT CAGACGACGC ACTGGCTGAC GTTTCCCTCA CTGCGGCGGA GACGGAAGAC GCCCTCGATG ATGAGGCGCT CGATTTGCCT GCCGCCGGTG CGGCCCAGCC AGCCGAGCCG ATCATCGTAG AGATTCCTGA AGCCATGCAC GGCGAGCGCC TGGACAAGGC GCTTGCCAAG CTGCTGCCCG ACTATTCGCG TAGTCGCCTT CAACAATGGA TTGATGCCGG CGCGGTTCGC CTGCATGGAG AGGTGGTGCG CCCGCGTGCG GCCATCTCCG GCGGCGACCG CATCGAAGTC GTGCCGCAAC GCGCGGCGGA CGAAAACGCT TTCGTTGCCG AGCCCATCGA TCTTGATGTG GTGTACGAAG ACGACACGCT GCTCGTCATC AACAAGCCAG CCGGGCTGGT GGTGCATCCG GCTGCGGGCA ACTGGAGCGG CACGGTGCTC AATGGCTTGC TGCACCGCTA TCCGGACGCC GTGGAGCTGC CGCGCGCCGG CATCGTCCAC CGCCTCGACA AGGACACTTC CGGCCTGATG GTGGTCGCTC GTACGTTGCC AGCGCAAACC GATCTCGTGC GGCAATTGCA GGCGCGTACC GTCAAGCGGA CTTATCTCGC GCTGGTGTGG GGCGAGACAC CGGAAGAGGC CACGATCGAC GCGCCGATCG GCCGCGACCC GCGCGACCGC ACGCGCATGG CCATCATCGA GACGGCCAGC GGCAAGCCGG CGCGCACGCA TTTCAAGACG CTTGACGTGG TGGACCTCGG GCGCGCACAG GTGTCGCTGG TGCGCTGCCA GCTTGAGACC GGCCGCACCC ACCAGATCCG GGTGCACTTT GAATCGGAGG GGCATCCGTT GCTTGGTGAT CCGGTCTACA CGCGTAACTT CCGACGTGGT CAGCCGCAGA CGATCAAGGC GCCGCTGCCT GTACCTTTTG CGCGGCAGGC GTTGCATGCA GTGCGCCTGG GGCTCGTGCA CCCAGCATCG GGCAAATCGG TGCACTGGGA AGCCGGCGTG CCCGACGATT TTGCCGATTT GCTGGAAGCT CTCGACCTGG ACCCCGATGC CGATGTCAAC TGA
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Protein sequence | MKNRIKHYSP SPVSDDALAD VSLTAAETED ALDDEALDLP AAGAAQPAEP IIVEIPEAMH GERLDKALAK LLPDYSRSRL QQWIDAGAVR LHGEVVRPRA AISGGDRIEV VPQRAADENA FVAEPIDLDV VYEDDTLLVI NKPAGLVVHP AAGNWSGTVL NGLLHRYPDA VELPRAGIVH RLDKDTSGLM VVARTLPAQT DLVRQLQART VKRTYLALVW GETPEEATID APIGRDPRDR TRMAIIETAS GKPARTHFKT LDVVDLGRAQ VSLVRCQLET GRTHQIRVHF ESEGHPLLGD PVYTRNFRRG QPQTIKAPLP VPFARQALHA VRLGLVHPAS GKSVHWEAGV PDDFADLLEA LDLDPDADVN
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