Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1574 |
Symbol | ispD |
ID | 8019222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1669349 |
End bp | 1670107 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644830352 |
Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
Protein accession | YP_002981530 |
Protein GI | 241663170 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.214959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0591838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATTT CCCACCCTGG CCGACGCCGT TTTGCGCTGA TTCCCTCGGC CGGCACCGGC TCGCGCGCCG GCGGCGATCT GCCCAAGCAA TATCAGGCGA TTGCCGGGCG GCCGATGCTG TGGCACACGG CACAGGCATT CCTGGCCAGC CCCGAAATCG ACTCTGTGCT GGTGGTGACG ACACCCGGCG CACAGCCGCT CGTGCAACGC TTTCCCGACG CGGGTTTTAA CGCAGCGAGG CTGGTGGAGG TCGATTGCGG TGGCGATTCG CGCCATGCAT CCGTCACGCA AGGGTTGGCG GCGTTGCGCC GGCTGGGCGC ACGCGATGAC GACTGGGTGC TCGTGCACGA TGCGGCCCGC CCCGGGTTGA CGCCCGCCCT GATCGCGCGG CTGGTCGCGG CCGTTGAGGC CGAAGGCACG CAAGCTGCGG GGGGCATCCT GGCGCTGCCC GTGGCCGACA CGCTCAAACG CGCCGATGCG GCACAGCACA TTGTTGCGAC CCTGCCGCGC GATGGCCTGT GGCAAGCGCA GACGCCGCAG ATGTTTCCGC TTGGCCTGCT GGAGCGCGCC TTGCGGGAGG CGCTGTTGCA GCATCGCATC GTCACCGACG AGGCCAGCGC AATTGAAGCC GCCGGTTACC CGCCGTTGCT TGTGCCCGGC GCATTGCGCA ACTTCAAAGT GACGTATCCC GATGATTTCG CGCTCGCCGA GGCCATCCTC GCGCAGAGCG CACCACCCGA CGAGGCATCG CAAGCATGA
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Protein sequence | MSISHPGRRR FALIPSAGTG SRAGGDLPKQ YQAIAGRPML WHTAQAFLAS PEIDSVLVVT TPGAQPLVQR FPDAGFNAAR LVEVDCGGDS RHASVTQGLA ALRRLGARDD DWVLVHDAAR PGLTPALIAR LVAAVEAEGT QAAGGILALP VADTLKRADA AQHIVATLPR DGLWQAQTPQ MFPLGLLERA LREALLQHRI VTDEASAIEA AGYPPLLVPG ALRNFKVTYP DDFALAEAIL AQSAPPDEAS QA
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