| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1559 |
|---|
| Symbol | |
|---|
| ID | 8019206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 1652228 |
|---|
| End bp | 1653604 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644830337 |
|---|
| Product | phosphate-selective porin O and P |
|---|
| Protein accession | YP_002981516 |
|---|
| Protein GI | 241663156 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG4942] Membrane-bound metallopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.186929 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAA CCGCCTTGTC GGTAGCCGCC GCCATTGCGC TGATGGGGGC CGGCGCAGCC
AATGCCGCCA CCACCGCGCA ACTCGAACAG AAACTCGACG CCATGGCCGC GCAGATTGAA
GCGCTCAAGG CCGAACTGAA AGAGGTGAAG GCGCAGAACG CGACGCTCGC CACGCAGCAG
CAGACGCAGG CGAAGGCACA GGCACAGCAA ACCGCGGCCC TGCAAGACGT GCAGCAGACC
GTGCAGACGG CACAGCTCGC CTCGACCAGG CCATCGCCGC TGGACAACCT TACGCTGTGG
GGCTACGGCG AAGCCAACTA CAGCCGCCCG ACGCGCCGTT CCGAAGACAC CAAGTTCGAC
CTTGCGCGCG CAGTGTTCGG TATCGGCTAC AAGTTCGACG ACAAGACGCG CTTCAACTCC
GAATTCGAGA TCGAGCACGC CATCACGTCG GCCACCGACT CGGGTGAATT CGAAGTCGAG
CAGTTCTACA TCGACCACAA GCTGACCGAC AAGATCGGCC TGAATGCGGG CCTGTTCCTG
ATCCCAGCGG GGTTCATCAA CCGCAACCAC GAGCCGACCA ATTACTACGG CGTGCATCGC
AACTTTGTCG AGACGCTGAT CATCCCGAGC ACGTGGCGTG AGGGCGGTCT CTCGCTGTAC
GGCGATACCG ATTTCGGCCT GAACTGGAAT GTGGGTCTGA CTACCGGGCT GGACCTGGCC
AAGTGGAACT TCAACCCGGA GAACCCGCTG TTTAAGTCCG CGCTGGAGAT GCAGAACAAC
GCCATCGCCC CGATGCAGAC CTCGCACCAG GAACTGGGGC TGGCCAACGC CAAGAACCTG
TCGCAGTATG TGGCGCTGAA CTACACCGGT ATTTCGGGCG TGACGCTGGG CGGCTCGGTC
TTCACGGGCA AGAGCAGCCG CTCGAGTACC GAAGCCGTGC TGCCTGAACA GCGCGCCACG
CTGTACGAAG CGCACGCGCG CTGGACGCCG GGCAAGTGGG ATCTGTCTGC CCTGTATGCA
CGCGGTACGT TCAGCAACAC CGCTGCCGCC AATCAGCTGA ACCCGGGTGC CGCCAACCCG
ATGCCGGCGG CGTTCTACGG CTGGTATGCA CAGGCGGCCT ACAACCTGTG GCAGAAGGGC
GACTACCGCT TCGCGCCGTT CGTCCGCTAT GAACGCTACA ACATGGCCGA GAAGTACGAA
GGTCTGGCTC CGGGCTTCAC GATGCCTGCC GGTTGGCCCT CGCTGTCGGA CACCGTGTAC
ACCATCGGCG CGAACTTCTA TCTGAACCCG AACGTGGTCT TCAAGGTGGA CTACCAGCGC
TTCAAGCAGA ACCGCGATTT CTCTCGTGTG GATCTGGGTC TGGGCGTGTC GTTCTAA
|
|---|
| Protein sequence | MKRTALSVAA AIALMGAGAA NAATTAQLEQ KLDAMAAQIE ALKAELKEVK AQNATLATQQ
QTQAKAQAQQ TAALQDVQQT VQTAQLASTR PSPLDNLTLW GYGEANYSRP TRRSEDTKFD
LARAVFGIGY KFDDKTRFNS EFEIEHAITS ATDSGEFEVE QFYIDHKLTD KIGLNAGLFL
IPAGFINRNH EPTNYYGVHR NFVETLIIPS TWREGGLSLY GDTDFGLNWN VGLTTGLDLA
KWNFNPENPL FKSALEMQNN AIAPMQTSHQ ELGLANAKNL SQYVALNYTG ISGVTLGGSV
FTGKSSRSST EAVLPEQRAT LYEAHARWTP GKWDLSALYA RGTFSNTAAA NQLNPGAANP
MPAAFYGWYA QAAYNLWQKG DYRFAPFVRY ERYNMAEKYE GLAPGFTMPA GWPSLSDTVY
TIGANFYLNP NVVFKVDYQR FKQNRDFSRV DLGLGVSF
|
|---|
| |