Gene Rpic12D_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1530 
Symbol 
ID8019175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1620757 
End bp1621365 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content64% 
IMG OID644830307 
ProductLysophospholipase 
Protein accessionYP_002981488 
Protein GI241663128 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.177051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCAC TCGCACAGAC GGCTGCAGCA CAAGGCGCGC CTGCATCGCA TCGCGTGGTG 
GTGCTCGGTG ACAGCCTGTC GGCGGGATAC GGCCTGGCAC AAGGCACAGG ATGGGTGGCG
CTGCTCGACA GGCGCCTCAA AGAACGGCAG CCCGATTATA GCGTCGCCAA TGCAAGCATC
AGCGGCGACA CCACGGCCGG CGGCCGCTCG CGCCTGCCCG CCGTGCTGGC CCGCGAAAAG
CCCTCCATCG TGATTCTCGA ACTGGGCGGC AACGATGCCC TACGGGGCCT CTCGCTCGCC
TCCAGCGAGG CCAACATGAA AGCAATGATC GAAGCGTCGC AAGCAGCCGG CGCGAGGGTG
CTGCTGGTTG GCATGCGCAT CCCGCCCAAC TACGGTCCGG ATTACAGCGA GCGTTTCTTC
GCCATGTTCG GCAAGCTGGC GCAGCAGTAC AAGCTGCCAC TGGTGCCATT CCTGCTCGAA
GGGGTTGCGC AGCGGCCCGA CTGGTTCCAG GAAGATCGCA TCCACCCCAT TGCCGCAGCG
CAGCCGACGA TGCTCGATAA CGTGTGGCCC AAACTGGAAC CTCTCCTTAA AGCCCGGGTC
GGAAGATAA
 
Protein sequence
MLPLAQTAAA QGAPASHRVV VLGDSLSAGY GLAQGTGWVA LLDRRLKERQ PDYSVANASI 
SGDTTAGGRS RLPAVLAREK PSIVILELGG NDALRGLSLA SSEANMKAMI EASQAAGARV
LLVGMRIPPN YGPDYSERFF AMFGKLAQQY KLPLVPFLLE GVAQRPDWFQ EDRIHPIAAA
QPTMLDNVWP KLEPLLKARV GR