| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1524 |
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| Symbol | |
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| ID | 8019169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 1610472 |
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| End bp | 1611686 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830301 |
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| Product | beta-lactamase |
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| Protein accession | YP_002981482 |
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| Protein GI | 241663122 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00136534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.421597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGCGC TGCTCGCTTG CAGCGTCGCC ATCGCCTCTC CCGATGAAGA TCGACTCGGC
AAGGCGCAAG GCTATCCGCT TGCGCCAAGC GCGGCCCGCA TCCACGAGGC GCCGTACATC
GTGGGGGCCT TCAGCGGCAT GGACCGCATC TCGCCGTCTT GCGAACTGGC GCCGGCCGAC
CAACCGGTGC AGCTCAAGAT TGCAGAAAAA GAGGCGGATG TCCGGTATCG CTTCCGCAAC
CATGACTACA CGCTGGCCGA CTACATGGAG CATCAGCGCG CGACCGCTGT GCTGATCGTT
CAGGACGGCG TCATCCTGGC GGAGCATTAC GGCTACGACC GCACGCGAGA CATGCGGATG
CTCTCAAACT CGATGGCCAA GACGCTGGTT GCACTGGCAA TTGGCAAGGC GCTGGAGGAT
GGAAGCCTGC GCTCGCTAGA AGACCGTGTG GACCAATACG TGCCCGACCT TGCAAGCACG
CTGTACGGTG GAACGCGCAT CGTCGATCTG CTGCGCATGG CCTCTGGTGC CAAGTATGTC
GAGGACTACA CCCCGACCGA CGACCGGGCA CGCTTCCTCA AGACGGCAGC GGAGCAAGGC
GTGCTCGCGG CAGCGGCCCA GGTCAACGAG CGCGCCGATG CGCCGGGCAC GCGTTTCAAC
TATGCGGGCG CGCAAACCGA GGTGTTGGCG CTCGTGCTGC AAGCGGCGAC GCACCGCAGC
CTGTGCGACT TCGTTGACGA CAAGCTATGG AAGCCGATGG GGGCCGAAGC CAAAGCGACC
TACCTCCTGC GTCAATCCGA CGGATCGGCG TTTGCACAAG GCGGTTTCAA TGCGACGGCG
CGGGACTACG CGCGCCTCGG GTCCATGCTG GCCAACGATG GCATGGTGCA AAGCCGGCAA
GTCGTGCCGC GAGACCTCTT GCTCGACATG ACCGACGCAT CGCGCCAGCC CGACGCGTTT
CGCCCAGGGC AGATGACGTA TCACGGCAGC CGCTACTACG GTTACGGCTT CCAGGTGTGG
CTTCTGCCGG GACAAGCACG GCGATTCGTT CTGCTCGGCA TCCATGGACA GGCGATCTAC
GTGGACCCGC AATCCAGGCT CACCATGGTC CATCTTGCGG TTGGCCAGGA CGCGTCGGGC
GATGCAAGCG GTGCGCACCT GGGCGCTGAG CGTGATGCGT TGTGGCGCGG CGTTGTGGAG
AAGTTTGGCC GCTAG
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| Protein sequence | MCALLACSVA IASPDEDRLG KAQGYPLAPS AARIHEAPYI VGAFSGMDRI SPSCELAPAD
QPVQLKIAEK EADVRYRFRN HDYTLADYME HQRATAVLIV QDGVILAEHY GYDRTRDMRM
LSNSMAKTLV ALAIGKALED GSLRSLEDRV DQYVPDLAST LYGGTRIVDL LRMASGAKYV
EDYTPTDDRA RFLKTAAEQG VLAAAAQVNE RADAPGTRFN YAGAQTEVLA LVLQAATHRS
LCDFVDDKLW KPMGAEAKAT YLLRQSDGSA FAQGGFNATA RDYARLGSML ANDGMVQSRQ
VVPRDLLLDM TDASRQPDAF RPGQMTYHGS RYYGYGFQVW LLPGQARRFV LLGIHGQAIY
VDPQSRLTMV HLAVGQDASG DASGAHLGAE RDALWRGVVE KFGR
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