Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1514 |
Symbol | |
ID | 8019159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 1598492 |
End bp | 1599475 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644830292 |
Product | type IV / VI secretion system protein, DotU family |
Protein accession | YP_002981473 |
Protein GI | 241663113 |
COG category | [S] Function unknown |
COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.568631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.950361 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAAC GTCAGCGTTC AAAAAAAGCG CCAGTCTGGC TGGCCGATCA AGGTGCGAAA CCTGGCAAGC CGCAGGCCAA GTCCGAGCGG AAAGCGCCTG CGGCTGAGAA GAAACTCACG GATATCAAAG GCGCCATCCA TGGCAATGAC GCCAAGCCGG TGACGGTCGA GGCGTACAGT GAAGCCGCGC TTCAGAAAAT GCTGGATCGC ATCAAGCGAA CGGAGCATCC GTGGGGCTTG AGAATCGCAG CAGGTCGACT ACTCAGGGCC ATCGCCGATC TGTCTTCCAT CAAGCACCTC AGACGCGGTC AAATCGAGCA CCTGCGCGCC CTGCTGGTAC TCGAAATCCA GACCTTTGAA AAGCTTTGTC ATCGGGCGGG CTTTGATCGT CGTCACATCG TGGGGGCGAG CTATTGCTTG TGTGCTGCGT TGGATGAGGA GGCGCATCAC ACCCCATGGG GCGGTGGCGG CAAAGACGGC ATTGGCGCAT GGTCGCAACA CTCCCTCACC GCGCAGTTCC ATGGCGACCG CGATGGCGGC ATCAAGGTGT ATCAGCTGCT CGCGCGCCTG GTCGAAGACC CCGATGCCAA TCTACCGCTG ATTCACTTGA TTTACGTCAT CATGAGCGTG GGCTTCATGG GGCGCTACCG CGTCGAGGGG AATGGAGAAC GCGAACATCA ACTGTTGCGT GAAAAGCTCT ACGCGATCGT GAAGGCTAGA GTTCCCCCCC TCCCGCGGGA GCTTTCACCG TCATTACACG TCGCCACCGA ACGCAACCTC AAGCCGATCT CCTGCGTTCC TGTGTGGTTG ACTGCAGTCG TTGGCCTGGT GATTGCCTCT GGAACCTATG CGTACTTCCA ATTCAAGCTG CACAAGGCAC AGGAGGCAGT CTTGCAAACG GTTGAAGCCA TCAATCAGAT GGTCTCCGCC CCTCCGCCTT TGCCGGCGCT CGACGCGCCA AAATCCCGAG CGAGCGGCCG ATAG
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Protein sequence | MAKRQRSKKA PVWLADQGAK PGKPQAKSER KAPAAEKKLT DIKGAIHGND AKPVTVEAYS EAALQKMLDR IKRTEHPWGL RIAAGRLLRA IADLSSIKHL RRGQIEHLRA LLVLEIQTFE KLCHRAGFDR RHIVGASYCL CAALDEEAHH TPWGGGGKDG IGAWSQHSLT AQFHGDRDGG IKVYQLLARL VEDPDANLPL IHLIYVIMSV GFMGRYRVEG NGEREHQLLR EKLYAIVKAR VPPLPRELSP SLHVATERNL KPISCVPVWL TAVVGLVIAS GTYAYFQFKL HKAQEAVLQT VEAINQMVSA PPPLPALDAP KSRASGR
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