Gene Rpic12D_1513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1513 
Symbol 
ID8019158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1598215 
End bp1598499 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content61% 
IMG OID644830291 
ProductPAAR repeat-containing protein 
Protein accessionYP_002981472 
Protein GI241663112 
COG category[S] Function unknown 
COG ID[COG4104] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.462725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.806121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATCCA GGTCCATCAT CGTGGTCGGA GACGTCAACT CCAGCAACGG CCCCGTCATC 
AGCGGATCAG CAACGGACAC CATTGACGGC AAGCCGATCG CCCGCAAGGG CGATCTCGTG
GACTGCCCCG CGCGCTACCC AGATGGACGC TTGCATGGCA TCAACCCCAT CGTTGAAGGT
GACGATTCCA TGATCGTGAA CGGCCAACCG GTGGCTCTGC ACGGGCATCG TTGCCGATGC
GGCTGCGCAC TCATCGGCAC CACGACGGGG TATGTCGATG GCTAA
 
Protein sequence
MLSRSIIVVG DVNSSNGPVI SGSATDTIDG KPIARKGDLV DCPARYPDGR LHGINPIVEG 
DDSMIVNGQP VALHGHRCRC GCALIGTTTG YVDG