Gene Rpic12D_1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1504 
Symbol 
ID8019149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1588055 
End bp1588849 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content66% 
IMG OID644830282 
ProductABC transporter related 
Protein accessionYP_002981463 
Protein GI241663103 
COG category[R] General function prediction only 
COG ID[COG1101] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCG CACAAGGACT CACCCTCACC TTCAACCCGG GCACGCCGAT TGAGACGCGC 
GCGCTGCGCG GCCTGTCGCT GGAGATCCCG TCGGGCCAGT TCGTCTCCGT GATCGGCTCG
AACGGCGCCG GCAAGTCGAC GTTCCTGAAC TCCATCAGCG GCGACCAGCT GGTCGACTCC
GGCCGCATCA CCATCGACGG TGAAGACGTC ACGCGCAAGA CCGCGTGGCA ACGTGCCGAC
AAGGTCGCCC GCGTGTTCCA GGACCCGATG GCCGGCACCT GCGAGAACCT GACCGTTGAA
GAGAACATGT CGCTGGCCAT GTGCCGTGGG CAGCGTCGCG GCTTCAAGTT CGCGACCAAC
CGCAAATGGC GCGAGATCTT CCGCGAGCAA CTGCGCCGGC TGGACCTCGG CCTGGAGAAC
CGCCTGACCG ATCGTATCGG CCTGCTCTCG GGTGGCCAGC GTCAGGCCGT GAGCCTGCTG
ATGGCCTCGC TGCAGCCGTC GCGCATCCTG CTGCTGGATG AGCACACCGC CGCGCTCGAC
CCGAAAACGG CCGCCTTCGT GCTGGAGCTG ACCGCCAAGA TCGTCTCGGA GAGCAAGCTG
ACGACGATGA TGGTGACGCA CTCCATGCGC CAGGCGCTCG ACTACGGCGA CCGCACGGTG
ATGCTGCACC AGGGCAACGT GATCCTCGAC GTGCAAGGCG AGGAACGCCG TGGCCTGGAC
GTGCCGCACC TGCTGCAGAA ATTCGAGGAA ACGCGCGGTG CCAAGGTGGA CGACGACGCG
CTGTTGCTGG GCTGA
 
Protein sequence
MLSAQGLTLT FNPGTPIETR ALRGLSLEIP SGQFVSVIGS NGAGKSTFLN SISGDQLVDS 
GRITIDGEDV TRKTAWQRAD KVARVFQDPM AGTCENLTVE ENMSLAMCRG QRRGFKFATN
RKWREIFREQ LRRLDLGLEN RLTDRIGLLS GGQRQAVSLL MASLQPSRIL LLDEHTAALD
PKTAAFVLEL TAKIVSESKL TTMMVTHSMR QALDYGDRTV MLHQGNVILD VQGEERRGLD
VPHLLQKFEE TRGAKVDDDA LLLG