Gene Rpic12D_1503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1503 
Symbol 
ID8019148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1587145 
End bp1588053 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content65% 
IMG OID644830281 
Productinner-membrane translocator 
Protein accessionYP_002981462 
Protein GI241663102 
COG category[R] General function prediction only 
COG ID[COG4120] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.26589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTGT TTTCATTGCT CGGCGCCCTG GAGATCGGTC TGATCTTCAG CCTCGTGGCG 
CTCGGGGTGC TGATTTCCTT CCGCATCCTC AACTTCCCTG ACCTCACTGT CGACGGCAGC
TTCCCGATGG GCGGCGCCGT GGCGGCCACG CTCATCGCCG GCGGACACGA TCCGTTCATG
TCGACGCTGG GTGGCACGCT GGCCGGCGCA GTTGCCGGTT TCATCACGGG CTGGCTCAAC
GTGCGCCTGA AAATCATGGA TCTGCTCGCC AGCATCCTGA TGATGATCGC GCTGTACTCG
GTCAACCTGC GCATCATGGG CAAGCCGAAC GTGCCGCTCA TCTCCGAGCC GACGGTCTTC
TCGCTGCTGC AGCCCGAGTG GATGCCCGAC TACGTGTTCC GACCCGTGCT GCTGGGTGTT
GTCGTGGTGG TCGTCAAGCT GCTGGTGGAT TGGTTCTTCT CGACGCAGAT CGGCTTGTCG
CTGCGTGCCA CGGGCGCCAA CCCGCGCATG GCGCGCGCAC AGGGTGTCGC CACCGGCGCT
GCCACGTTGG CCGGCATGGC GCTGTCCAAC GCCCTGGTGG CGCTTGCTGG TGCGCTCTAC
GCGCAAACGC AGGGCGGCGC CGACGTGTCG ATGGGTATCG GCACGATCGT CATCGGCCTG
GCTGCCGTCA TCATCGGCGA GACCGTGTTG CCGGCACGCC GCCTGGTGCT GACCACGCTG
GCCGTGGTGG TGGGCGCGAT CCTGTATCGC TTCTTCATCG CCCTGGCGCT CAACAGCGAT
TTCATCGGCC TGCAGGCGCA AGACCTGAAT ATGGTGACCG CCGCGCTGGT GGTGATCGCG
CTCGTGCTTC CCGGTGTGCG CCGCAAGGTG TTCGGCAAGT TCGCCAAGAC CACTACCAAG
GGGAACTGA
 
Protein sequence
MSLFSLLGAL EIGLIFSLVA LGVLISFRIL NFPDLTVDGS FPMGGAVAAT LIAGGHDPFM 
STLGGTLAGA VAGFITGWLN VRLKIMDLLA SILMMIALYS VNLRIMGKPN VPLISEPTVF
SLLQPEWMPD YVFRPVLLGV VVVVVKLLVD WFFSTQIGLS LRATGANPRM ARAQGVATGA
ATLAGMALSN ALVALAGALY AQTQGGADVS MGIGTIVIGL AAVIIGETVL PARRLVLTTL
AVVVGAILYR FFIALALNSD FIGLQAQDLN MVTAALVVIA LVLPGVRRKV FGKFAKTTTK
GN